Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02626 ATGGAAGGAGATTCAGTGAAGTTAATAGGATTTTGGGGTAGTCCAGCTGTTCTAAGAGTGAAGTGGGCACTAGCAGTTAAAGGAATAGAGTGCCAATATGTGGAAGAAGATCTCAGCAACAAGAGTGACATGCTCTTTAAATACAACCCTGTCTACAAAAAGGTACCTGTTCTTGTGCACCAGGATCTGAGCGAGTTATCGATGGAACAGATCGGGGAAGACAGAGCTGACGAGGATTTAGCAACCTATGCTACGACGGAAGGATGTTGGAATTGGGAGAGGTTAGCTCAGCTAATCCCAGAGGAGATTATCGTTATGATTCGTACTGTTAAAGCTCCCCACCACTCCCTCGGACCGGATTCCCTAGGATGGCTACCAAAACCTCAGGGCAGTTTCTCTATCAAATGA 408 0.4583 MEGDSVKLIGFWGSPAVLRVKWALAVKGIECQYVEEDLSNKSDMLFKYNPVYKKVPVLVHQDLSELSMEQIGEDRADEDLATYATTEGCWNWERLAQLIPEEIIVMIRTVKAPHHSLGPDSLGWLPKPQGSFSIK 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02626 135 Pfam Glutathione S-transferase, N-terminal domain 5 63 IPR004045 -
Aip01g02626 135 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 89 IPR004045 -
Aip01g02626 135 PANTHER - 2 62 - -
Aip01g02626 135 SUPERFAMILY Thioredoxin-like 2 62 IPR036249 -
Aip01g02626 135 Gene3D Glutaredoxin 1 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02626 Aip-Chr1 126630044 126634343 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02626 4 62 Glutathione S-transferase Gene Family AT2G29490 57.627 2.30e-18 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02626 K00799 - aip:110266907 281.182