Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02603 ATGGGGTTTTTGCTGAAAGAAGCTTTAAAGACTCTGTGCGGTCGGAATCAGTGGTCTTATGCTGTGTTCTGGAAGATCGGATGCAACAATTCAAAACTATTGATCTGGGAAGAATGTTATTATGAACCATTGCCATGTTCTTTCCCTCAACCAAATTTTGGGAATGGAGAAGGAAGCTGGTTTTCTTCTGAGTCTCACTCATCTCAGATGGGGATCCAAGAGGAGGATAGAGTTTGTTCTTTGATTAACAAAATGACAGTGAATAATTCAGTCAATATCACAGGTGAAGGAATAATTGGACGCGCTGCATTTACTGGCAACCATCAGTGGATTCTTTTCAACAATTTCAGTAGAGATGCATATCCACCTGAGGTATATGCTGAGATGCATCACCAACTTTCAGCTGGAATGCAGTGA 417 0.4101 MGFLLKEALKTLCGRNQWSYAVFWKIGCNNSKLLIWEECYYEPLPCSFPQPNFGNGEGSWFSSESHSSQMGIQEEDRVCSLINKMTVNNSVNITGEGIIGRAAFTGNHQWILFNNFSRDAYPPEVYAEMHHQLSAGMQ 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02603 138 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 138 - -
Aip01g02603 138 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 138 IPR043561 GO:0003700|GO:0006355
Aip01g02603 138 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 119 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02603 Aip-Chr1 126395595 126397260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02603 1 138 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 52.899 1.01e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02603 - - aip:107629784 235.728