Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02599 ATGGAGTGTAGAAGAGGAAACACCATAGCTCGGAGCTCCATCTCCATAGCCACTACTCTCAACTCTAGTCAGGCTTTTGCTGTCAAGTCAGCGAATTTACATCGCTACAAGCAACTCAAGACAGGCCAGAAGGAACACATGTGGCTTATCTGGGGTTGTAGTGGCCCGTTTCACTCACCAAATATTACTTGGACTTATCTTCACTTCCAAGGAATAATGCACGGCGATGTGAAGCGGCAGAATGACTTGGTGATAGCACAAGGAGCCAAGATAACTGATTTTGATTACGCTCTTAAGGTGGTGGCTGATGGTGAGAGTGTGATTCAGGACGCCGGCGTACAAGACACATGGAGAGAAGTAGAATTTTCTGTTGATGTGTGGACACTTAGGTGTGTAGTGTTAGAAATGATAACAGAAGAGCCACTCTGGCACTATCTACATGATAATGACCCTATTAAGGTACTTTATCGGATTGGTTTCTTGGATGAGGTGCCAGAAATTCCAAGCCATGTCTCAGACGAAGGAAAGGATTTTTTGGCGAAATGTTTTAAGAGAGACCCTAGTGAGAGGGGGTTGGTTGAGGAACTTCTTAGGCATGGATTTATTCATACCTTTAATGAGCATATTGATTATGAACTCGAGTTGGGTAGCTTTGAGCATTTATATACTTCCATGGATATGTTGGAAATAGAGCATGACTATACATAG 708 0.4322 MECRRGNTIARSSISIATTLNSSQAFAVKSANLHRYKQLKTGQKEHMWLIWGCSGPFHSPNITWTYLHFQGIMHGDVKRQNDLVIAQGAKITDFDYALKVVADGESVIQDAGVQDTWREVEFSVDVWTLRCVVLEMITEEPLWHYLHDNDPIKVLYRIGFLDEVPEIPSHVSDEGKDFLAKCFKRDPSERGLVEELLRHGFIHTFNEHIDYELELGSFEHLYTSMDMLEIEHDYT 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02599 235 ProSiteProfiles Protein kinase domain profile. 1 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02599 235 PANTHER MAP KINASE KINASE KINASE 65 205 - -
Aip01g02599 235 SUPERFAMILY Protein kinase-like (PK-like) 66 224 IPR011009 -
Aip01g02599 235 SMART serkin_6 3 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02599 235 Pfam Protein kinase domain 65 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02599 235 Gene3D Transferase(Phosphotransferase) domain 1 63 218 - -
Aip01g02599 235 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 65 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02599 Aip-Chr1 126360221 126361054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02599 66 202 MAP Kinase Kinase Kinase AT5G55090 42.657 1.56e-26 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip01g02599 Pkinase 3.7e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02599 K20716 - ahf:112721951 403.675