Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02567 ATGCAAAACAAAATGGAATACAAACTCAATTCTTCTTCATCGATTCCAATAATCCACGTCCCCACAAAGATCTCAAATTCTCCACCTCCTCCTTCTTCTTCTCCTCCCAATTCACAATCTCAATCTCCAATTTCCTCTGCTCCGCCGTCGCCGCCTCCACCTGTGGTGGTGAGCCCTTGCGCCGCCTGCAAGATCCTCCGTCGCCGCTGCGTTGAGAAGTGTGTTCTTGCTCCTTACTTCCCTCCAACTGGTCCACTCAAGTTCACCATTGCCCATAGAGTCTTTGGAGCAAGTAACATTATCAAGTTCTTGCAGGAACTACCAGAAAGCCAAAGGGCAGATGCAGTCAGCAGCATGGTGTATGAGGCAAATGCAAGAATTAGGGACCCAGTTTATGGTTGTGCAGGAGCAATATGCCAACTTCAAAAGCAAGTGAGTGAGCTTCAAGCACAATTGGCAAAAGCACAAGCTGAGCTTGTTAACATGCACTGCCAACAAACCAATTTGGTTGCACTCATTTGCATGGAAATGAGTACTAGTAATACTCATCAATCTTCACATCAGGAACAACAACTTCAACACCACATGATGATGATTCAGCCTCAGAATAATAATAACAATAATAATCATGTTGATATGTCTTGCTTCATTGATGACAACAATCTTGCTTCTGCTTGGGAGCCTGAGCCTCTATGGACATAA 702 0.4459 MQNKMEYKLNSSSSIPIIHVPTKISNSPPPPSSSPPNSQSQSPISSAPPSPPPPVVVSPCAACKILRRRCVEKCVLAPYFPPTGPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAELVNMHCQQTNLVALICMEMSTSNTHQSSHQEQQLQHHMMMIQPQNNNNNNNHVDMSCFIDDNNLASAWEPEPLWT 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02567 233 MobiDBLite consensus disorder prediction 19 54 - -
Aip01g02567 233 MobiDBLite consensus disorder prediction 23 37 - -
Aip01g02567 233 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 32 228 - -
Aip01g02567 233 ProSiteProfiles LOB domain profile. 58 159 IPR004883 -
Aip01g02567 233 Pfam Lateral organ boundaries (LOB) domain 59 156 IPR004883 -
Aip01g02567 233 Coils Coil 138 165 - -
Aip01g02567 233 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1-LIKE 32 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02567 Aip-Chr1 126149769 126151727 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02567 55 233 AS2 family AT1G07900 63.187 2.10e-72 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aip01g02567 LOB 3.5e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02567 - - vra:106771364 260.381