Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02547 ATGTCTAAAGGGAGCAGTGTTACCTCCATGGTTTTACCATCATCACTAACACTACTACTGATGATGAGTATTTTCATTTCAATCTTTGTGATTTCCATTACTTGTTTTCATGATGATGAAGAGAGACACATATACTTGGTTCTATTGGAAGGAGATGGAATTGCTTTCCAAAAAGGTTCTCATAGTCAAGATTCAACAACAATTGATCCCAACAGGTTAATTAGTTCATATTTGGGCGCGGAAGCAGAAGCAAAACACGATGAAATTCTACAAAGCGCTCTGGAAAATGGAAGCTACAAGAAGCTCCACAGCTTCAAACACATGTTCAATGGGTTTTCCGTGCACACGAGCCGATCCCAGGCGACGAGGCTGAGAAACTTGGCCGGAGTGAAGCTTGTACAGAGAGACAATGGAGCCAAGCTTATGACAACCCACACTCCCCAGTTTCTAAGCTTACCCACTGGTATTTGGACGCAGCTTGGAGGACCTGCACACGCCGGCGACGGCGTTGTCATTGGTTTTGTTGACAGCGGCATCAACCCTACCCACCCTAGCTTCGCTTACGATCCCAACTTGCACCCTTTCACCTCTAACCTCTCTTCTTTCTCATCCGCTGAGTGTCAGTTCGGTCCCTTCTTCCCTGCTTCTTCTTGCAATGGCAAGATTGTGTCTGCCAAGTTCTTCTCTGCTGGTGCCCAAGCTGCGGTCAACCTTAATGCTTCTGTCGACATCCTTTCACCCTTTGATGCTGAAGGACATGGCAGTCATGTTGCCTCTATTGCTGCTGGAAATCGTGGTGTTCCCGTTGTTGTGAACGGTGTCTTCTATGGGAAAGCTAGCGGTATGGCACCTCGTGCAAGGATTGCGGTTTATAAGGCTGCATATCCAAGCGGGTCAACTCTTGCAGATGTTGTTGCAGCTATGGATCAAGCTGTGAGTGATAGGGTGGATATCTTAACAGTCTCTGTGGGACCAGATGAACCACCACCAGATGGCACATTAACCTTCTTAAACATGTTTGAGGTTGCCATGTTATTTGCAAGGAAAGCAGGAGTTTTTGTGGTCCAAGCTGCAGGGAACAAGGGTCCATATCCTTCAACTGTGGTCTCTTTTAGTCCCTGGGCCATGGGGGTTGGCGCTTCCACCACTGACAGAACCTACCCTGCTCATCTTCTTCTTGGAAATGGCCAAGTTCTAGATGGTGCTAGCCTATCAGGGCCAGGTTTTGGAAATGGAAAAGTTTTACAAAAGCTGGTGTTAGCCAAGGATGCATTAAAAAAAAATGGAACATTCCAACACTCTCCGGAATATATAGAAGAGTGCCAGCATCCAGAAGTTTTCGATCCAAACTTGGTGTTTGCAAGGATAGTTATCTGTACCTGTTCATATGGATTCTATACTGGAACCTCCTCTTTTGCTGCCATTGTTGATACGGCAAGGACTCTAGGATTCTCAGGTTTTATCTATGTTGCAAATCCAAGATATGGTAGTTACAAACCTCAGGCATATCCTTTTGCTCTTCCTTCCATATTGATCTCTCGTGTAGATGATGCCAAGGTTATATCACAATATTATGAAGAACATACCAAGAGGGATGAGAGAGGAAATTTCATAGAATCTGATGCCATGGCAGCTATAGGGGAAGGAAGAGTAGCATCTTTCACGGAGCGATCGCCGGTTGTTAGTTTATTTTCTTCAAGGGGTCCGGATATCAGTGACAATAGAAAAAGTCTTGCTGATGTACTTAAACCTGATGTTCTTGCTCCAGGGGACCAAATATGGGCAGCCTATAGCCCCATGAGTGTCTCGAATCCCATGCTGAGAGGGCATGAATTTGCAATATTATCCGGTACCAGCATGGCCACACCTCATGTAGCTGGAATCGCAGCACTAATCAAGCAATATAATCCATCATGGACTCCATCTATGATAGCATCTGCAATAACCACAACCAGCACAAAGTTTGATAATCTTGGAGAGAATATAATGGCAGAAAGCTATCCCATAGGCACCTTGCATCCCTCCACTCCCTTTGAATGTGGGGCAGGCATTGTCAACCCTAACCGTGCCAATGATCCAGGCTTGGTTCTGCCATCAGAGTTTGCAGACTATGTCAGCTTCTTATGCTCTTTGCCCAACATTGGCCAGGATACAATACTTGCTACCATAGGGGTACCTTGCAACCAATCATTTTCCGATCCATATGATCTAAACCTTCCTTCGGTAACAATATCTGCACTGAAAGGCTCAGCTTCTATGCGAAGAACTTTCATCAATGTGGGGAACAAAACGGAGACATATTTGGCCACTGTTATGCCTCCATTTGGAACTACCGTCGATCTGTCTCCAGCTTGGTTTACTATAAGTCCGCAAGGAACACAAGATCTGAACATTCGACTCAATGTTTACGCAACCATGACAAATTTCAGCTTTGGTGAAATTGTTTTGACAGGAAATTTGAATCACATTACTCTAAGCCCGAGCCTGCAAGATTCAAAGGAGTTCGGTTGTATTAGTTCCAAGATAACCTTAAGTGACAAGATAACCCAGCCCTAA 2556 0.4495 MSKGSSVTSMVLPSSLTLLLMMSIFISIFVISITCFHDDEERHIYLVLLEGDGIAFQKGSHSQDSTTIDPNRLISSYLGAEAEAKHDEILQSALENGSYKKLHSFKHMFNGFSVHTSRSQATRLRNLAGVKLVQRDNGAKLMTTHTPQFLSLPTGIWTQLGGPAHAGDGVVIGFVDSGINPTHPSFAYDPNLHPFTSNLSSFSSAECQFGPFFPASSCNGKIVSAKFFSAGAQAAVNLNASVDILSPFDAEGHGSHVASIAAGNRGVPVVVNGVFYGKASGMAPRARIAVYKAAYPSGSTLADVVAAMDQAVSDRVDILTVSVGPDEPPPDGTLTFLNMFEVAMLFARKAGVFVVQAAGNKGPYPSTVVSFSPWAMGVGASTTDRTYPAHLLLGNGQVLDGASLSGPGFGNGKVLQKLVLAKDALKKNGTFQHSPEYIEECQHPEVFDPNLVFARIVICTCSYGFYTGTSSFAAIVDTARTLGFSGFIYVANPRYGSYKPQAYPFALPSILISRVDDAKVISQYYEEHTKRDERGNFIESDAMAAIGEGRVASFTERSPVVSLFSSRGPDISDNRKSLADVLKPDVLAPGDQIWAAYSPMSVSNPMLRGHEFAILSGTSMATPHVAGIAALIKQYNPSWTPSMIASAITTTSTKFDNLGENIMAESYPIGTLHPSTPFECGAGIVNPNRANDPGLVLPSEFADYVSFLCSLPNIGQDTILATIGVPCNQSFSDPYDLNLPSVTISALKGSASMRRTFINVGNKTETYLATVMPPFGTTVDLSPAWFTISPQGTQDLNIRLNVYATMTNFSFGEIVLTGNLNHITLSPSLQDSKEFGCISSKITLSDKITQP 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02547 851 CDD PA_subtilisin_like 391 525 - -
Aip01g02547 851 CDD Peptidases_S8_3 140 653 IPR034197 -
Aip01g02547 851 Gene3D - 708 830 - -
Aip01g02547 851 PRINTS Subtilisin serine protease family (S8) signature 167 186 IPR015500 -
Aip01g02547 851 PRINTS Subtilisin serine protease family (S8) signature 616 632 IPR015500 -
Aip01g02547 851 PRINTS Subtilisin serine protease family (S8) signature 249 262 IPR015500 -
Aip01g02547 851 ProSitePatterns Serine proteases, subtilase family, histidine active site. 253 263 IPR022398 -
Aip01g02547 851 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 172 183 IPR023827 -
Aip01g02547 851 Pfam Fibronectin type-III domain 736 818 IPR041469 -
Aip01g02547 851 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 31 142 IPR037045 -
Aip01g02547 851 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 73 823 IPR045051 -
Aip01g02547 851 ProSitePatterns Serine proteases, subtilase family, serine active site. 617 627 IPR023828 -
Aip01g02547 851 Gene3D Peptidase S8/S53 domain 169 704 IPR036852 GO:0004252|GO:0006508
Aip01g02547 851 Pfam Subtilase family 167 661 IPR000209 GO:0006508|GO:0008236
Aip01g02547 851 ProSiteProfiles Serine proteases, subtilase domain profile. 146 691 - -
Aip01g02547 851 Pfam Peptidase inhibitor I9 79 141 IPR010259 -
Aip01g02547 851 PANTHER SUBTILISIN-LIKE PROTEASE SBT2.6 73 823 - -
Aip01g02547 851 SUPERFAMILY Subtilisin-like 141 695 IPR036852 GO:0004252|GO:0006508
Aip01g02547 851 Gene3D - 384 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02547 Aip-Chr1 125877367 125884404 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02547 13 827 Subtilisin-like Serine Gene Family AT1G62340 56.558 0.0 898
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02547 - - adu:107466444 1540.01