Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02539 ATGAAATCCTTAAAGCAGAGAGGATGCAAGGCCTTATGCTGCAGCAGTTGTAGGAGGCTTAGTGTGTCTTCCACAGAGGAAGCAGAGAGTTCATCAGCCTCCGATCGGTTTCCTTCCGTGTCGAGCGTCGCACACGCCATGGTGCAAGAGAGACTTGACCAGTTGATTAGGGAGAGGAGGATGGAAGAGAGACAGAGGAGGCAGCAAAGCAGAGTCAGAGAAAGAGAAAGAACTAAGTTTGTTGTGATGGTGGCAATGGAGAAGCGCTCTTATGATCCAAGAGAAGATTTTAGGGAGTCCATGATGGAGATGATAACAGCAAATCGCATCAAAGAAGCCAAAGATCTTCGTAGCCTACTCAACTATTATATCTCCATGAACTCCAATGAGTACCATAGTCTTATACTTGAGCTTTTTCATGAGGTTGTATTAGAGAAATTGGACAAAAGTCCAAGATTTCATCTTCCAGGAGGTGCTAGGCCGTTGGGCGTGAACTGGAGGCCGCCAGGCGTGAAAGAGGAAGGCGGAGAGTCCGTCGGGCATGCTAAAAGGGCCGCCGGGCACAAGAGCTGTCCGCTAGGCGCAAGTTCCTCCCGCCGGGTGTGCTGA 609 0.4975 MKSLKQRGCKALCCSSCRRLSVSSTEEAESSSASDRFPSVSSVAHAMVQERLDQLIRERRMEERQRRQQSRVRERERTKFVVMVAMEKRSYDPREDFRESMMEMITANRIKEAKDLRSLLNYYISMNSNEYHSLILELFHEVVLEKLDKSPRFHLPGGARPLGVNWRPPGVKEEGGESVGHAKRAAGHKSCPLGASSSRRVC 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02539 202 MobiDBLite consensus disorder prediction 164 202 - -
Aip01g02539 202 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 6 145 IPR038933 GO:0045892
Aip01g02539 202 ProSiteProfiles OVATE domain profile. 86 145 IPR006458 -
Aip01g02539 202 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 84 144 IPR006458 -
Aip01g02539 202 PANTHER TRANSCRIPTION REPRESSOR-RELATED 6 145 - -
Aip01g02539 202 Pfam Transcriptional repressor, ovate 90 144 IPR006458 -
Aip01g02539 202 Coils Coil 45 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02539 Aip-Chr1 125717632 125721440 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Aip01g02539 Ovate 9.6e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02539 - - gmx:102663136 176.792