Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02535 ATGAAGCTCGACAACTCCAACAACTCCAACGGCCAGAGTTTCGCCGGCGCCGACGACGACGTATTCGTGCCGCCGCTCAACTTCGCCATGGTCGATCAAGGCATTTTTAGGTCTGGTTTTCCCGACTCTGCCAACTTCAGCTTCTTAAAATCCCTTCGTCTCCGCACTGTTATATGTTTGTGCCCTGAACCGTATCCAGAAGTGACTTCTGAATTTCTCAAGGCCAACGGAATAAAGCTTTATCAATTCGGGATCGATGGATGTAAGGAACCCTTTGTCAACATCCCAGATGACACAGTTCGTGAAGCTTTGAAAGTAGTCCTCGATGTCAGGAACCACCCAGTACTAATTCATTGTAAACGAGGGAAGCATCGCACTGGTTGCCTTGTGGGATGCATCAGAAGATTGCAGAAATGGTGCCTATCTTCTGTATTTGATGAGTACCAAAGGTTTGCAGGCGCCAAGGCCAGAGTTTCGGATCAGAGGTTCATCGAATTGTTTGATATTTCTTGTCTCAAGTCAAACCCGCTCTCATTTTCTTGCTCCGGGAAATAG 555 0.4739 MKLDNSNNSNGQSFAGADDDVFVPPLNFAMVDQGIFRSGFPDSANFSFLKSLRLRTVICLCPEPYPEVTSEFLKANGIKLYQFGIDGCKEPFVNIPDDTVREALKVVLDVRNHPVLIHCKRGKHRTGCLVGCIRRLQKWCLSSVFDEYQRFAGAKARVSDQRFIELFDISCLKSNPLSFSCSGK 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02535 184 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP1 15 182 - -
Aip01g02535 184 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 22 169 IPR029021 -
Aip01g02535 184 PRINTS Plant and fungal dual specificity phosphatase signature 22 39 IPR020428 GO:0016791
Aip01g02535 184 PRINTS Plant and fungal dual specificity phosphatase signature 59 72 IPR020428 GO:0016791
Aip01g02535 184 PRINTS Plant and fungal dual specificity phosphatase signature 78 92 IPR020428 GO:0016791
Aip01g02535 184 PRINTS Plant and fungal dual specificity phosphatase signature 95 109 IPR020428 GO:0016791
Aip01g02535 184 ProSiteProfiles Dual specificity protein phosphatase domain profile. 27 181 IPR020422 GO:0006470|GO:0008138
Aip01g02535 184 PANTHER TYROSINE-PROTEIN PHOSPHATASE 15 182 - -
Aip01g02535 184 ProSitePatterns Tyrosine specific protein phosphatases active site. 117 127 IPR016130 GO:0016311|GO:0016791
Aip01g02535 184 CDD PFA-DSP_Siw14 22 168 - -
Aip01g02535 184 Pfam Tyrosine phosphatase family 23 175 IPR004861 -
Aip01g02535 184 Gene3D Protein tyrosine phosphatase superfamily 21 171 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02535 Aip-Chr1 125659911 125663106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02535 5 184 Protein tyrosine phosphatase (PTP) family AT4G03960 70.000 6.53e-96 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02535 K18045 - gmx:100785520 324.709