Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02506 ATGAGTTACTTGGGTGTGGGTGTTAGTCCTGGGACTGTGCCAGTTTATCACAGCAAGGACCTGAAGATGTTGGATAGGAGGGTGAAGATAGCAGAGGTGGTGCTGAGGTGTGTGATCCTTGGCCTTGGAGTTCTTGCAACTGTTCTTGTGGTAACTGATACACAAGTCAAAGTGATCCTGTCCTTTCAGAAGAAGGCTAAGTATACAGACATGAAGGCTTTAGTGTTCTTGGTAGTGGCCAATGCTTTGGCTGCTGGCTATTCCTTGATTCAAGGACTGTGCTGTGTTCTTAGCATAATTAGAGGGAGTGTACTCTTCAGCAAGCCCTTAGCTTGGATTATCTTCTCTGCTGATCAGGTAATGGCATATGTGACGATGGCGGCAGTAGCAGCATCAGTGCAATCAGCGGTGTTTGCAAAGGCAGGGCAAACTGAACTTCAATGGATAAAGGTTTGCAACATGTATGAGAAATACTGCAACAAAGTGGGAGAAGGAGTAGCTTGTGCTGTTGTGGTTAGCCTTAGCATGGTTGTCCTCTCTTGTATTTCGGCTTTTAGCCTCTTCCGTTTGTATGGCGGTAACAAAAACAAGAATGCAGGTTGGTAG 606 0.4587 MSYLGVGVSPGTVPVYHSKDLKMLDRRVKIAEVVLRCVILGLGVLATVLVVTDTQVKVILSFQKKAKYTDMKALVFLVVANALAAGYSLIQGLCCVLSIIRGSVLFSKPLAWIIFSADQVMAYVTMAAVAASVQSAVFAKAGQTELQWIKVCNMYEKYCNKVGEGVACAVVVSLSMVVLSCISAFSLFRLYGGNKNKNAGW 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02506 201 PANTHER CASP-LIKE PROTEIN 2B2 1 199 - -
Aip01g02506 201 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 33 186 IPR006459 -
Aip01g02506 201 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 1 199 - -
Aip01g02506 201 Pfam Casparian strip membrane protein domain 26 173 IPR006702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02506 Aip-Chr1 125077128 125078979 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02506 26 162 Miscellaneous Gene Families AT3G16300 24.648 3.61e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02506 - - gmx:100812100 271.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02506 01 125077128 125078979 Aip04g00626 04 7583462 7601529 PCT