Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02475 ATGTCATCAGTTACAAGATCCGTAGAAACGGACTATGACGATGAAGAAGAAGAAAGTTTCCCTGCGTGCAGCTGCAGTAGCTTTATGGCTAAGGGGTTCAAGAGAAACCAAGTGTATGATTGCAGCAGTGAGATAGGAGAGGAGGAGGAAGAAGATTACTATTATTCAGAGGAATTGTTTGAGATCAAGCTGATGAGGGAGGCTTTGGATACCATAACAGAAGAAGAAGAAGACGAGATGAGCACTGTCTTCTCTCTCGATTTTCATAAATGCGATGAAGAGGAAGAGAACTTGGTATATGTGGCAGTTGGAGAGGATGATTCAAGCATGGAAGTGTTATCATGGGCGTTGAAGCACGCCGTGACACCCTCCACCACCACCCTCTATCTCATACACGTTTTCCCTATCATCAAGTTCATTCCAAGTCCACTTGGAAAATTTCCAAGGAGTCATGTAAACAGAGAGTATGTTAACCACTTCTTGACTCAAGAGAAAGACAAAAGGAAATTGCTGCTTAAGAAATTCATTGACCTATGCATTCATTACAAGGTTAAGGCGGAGATTATGCTGATAGAGGGCGACAAGGTTGCTGAAGCCATCGTTGACCTTGTTGGGACACATGATGTAAGGAAACTGGTAATTGGGACAAACAGATCTAATTTAAGAAAATCAAGGAGTGGCATAGCGGACAAGGTACTCAAGAATGCACAGGAAACCTGTGATGTTAAAATCATATGCCAAGGAAGGGAAGTCATGGACAAAATGATTATCCGCAACTCAAATTCATCACGCTCCAGAGACAGCACCACTAGCTCACAGTCACAGTCACAGGATGAAGATGAACCCCGCAGCAGCATTGTCCCTCTTCCGCGTTTTGTGCCCAATCCCATTCCTAATTGGTTATTTAGGCTTTGA 915 0.4339 MSSVTRSVETDYDDEEEESFPACSCSSFMAKGFKRNQVYDCSSEIGEEEEEDYYYSEELFEIKLMREALDTITEEEEDEMSTVFSLDFHKCDEEEENLVYVAVGEDDSSMEVLSWALKHAVTPSTTTLYLIHVFPIIKFIPSPLGKFPRSHVNREYVNHFLTQEKDKRKLLLKKFIDLCIHYKVKAEIMLIEGDKVAEAIVDLVGTHDVRKLVIGTNRSNLRKSRSGIADKVLKNAQETCDVKIICQGREVMDKMIIRNSNSSRSRDSTTSSQSQSQDEDEPRSSIVPLPRFVPNPIPNWLFRL 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02475 304 Gene3D HUPs 92 254 IPR014729 -
Aip01g02475 304 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 22 301 - -
Aip01g02475 304 MobiDBLite consensus disorder prediction 257 290 - -
Aip01g02475 304 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 100 244 - -
Aip01g02475 304 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 22 301 - -
Aip01g02475 304 MobiDBLite consensus disorder prediction 257 282 - -
Aip01g02475 304 Pfam Universal stress protein family 100 237 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02475 Aip-Chr1 124449666 124451797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02475 99 249 U-box Gene Family AT4G25160 26.316 5.79e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02475 - - gmx:100818837 271.552