Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02456 ATGAGCACGGTGAAGCAGCTACAGATGCTGATTTTGATAGAGTTACCGAAGCTCATTATGATTTTCTTGGATCCTATTTGGGAAGCACAAGAAGCAATGATTTATTCTTACACAAGGCATATCAATGGCTTTGCTGCAATGCTCCGAGATGAAGAGGCTGCTGAAATTGCAAAACATCCAAAGGTTGTGTCGGTGTTCTTGAACAAAGGAAGGAAGTTACACACTACACGTACGTGGGAGTTTATGCTAATGGAGAAGCAAAGTGGGGTGATTAGCCCTGCTTCAGTGTTTAGCAAAGCCAAATTTGGTGAAGATACCATAATTGGAAACTTTGACACTGGTGTATGGCCAGAATCTCCTAGCTTTAGAGATGGGGGCATAGGTCCCATTCCTTCAAGATGGAAGGGATCCTGTGAGGGTGGTAGTCCTGACTTTCATTGCAACAGGAAGCTGATAGGAGCAAGGTACTTCAACAAAGGGTATGCTGCAAATGTAGGGGCAAGTGTACTGAAGAACGGTACTCTTAACACGGTGCGAGATTATGAAGGTCATGGATCACACACACTATCAACATTAGGTGGAAACTTTGTCCCCGGCGCTAACGTCTTCGGCTTTGGCAATGGAACCGCGGAAGGCGGCTCTCCTAAAGCTCGAGTGGCTACTTACAAGGTTTGTTGGCCGCCAGTTAACGGCAGTCAGTGCTTTGATGCTGATATCATGGCGGCTTTCGACATGGCTATACATGATGGTGTGGACATTCTTTCCCTCTCCCTTGGAGGGGATCCCGTTGACTACATTGAAGATGGTCTGGCCATTGGCGCATTCCATGCTTTCAGAAAGGGAATCACCGTCGTGTGCTCTGGTGGCAATTCGGGACCAAAACCAGGATCTATCTCCAACGTTGCGCCTTGGGTATTCACCGTAGCTGCAAGTACCTTGGACAGGGAGTTCGATTCTGTTGTTGAACTCGAGAATGGAAAGAACTTTACGGTAACAAACACTACCTTAGAAAAAAGATTCAATTTTTTATTCCATATCAATTCTAATCTTATATATACTTTTCAGGGTGCAAGCCTTTCTAATGCTATGCCACAAAAGAAATTTTACCCACTCATCAATGGTTTAGATGCAAAATTGGCTAATGCAACTGATGGAGACGCTATTCTGTGTAAGATAGGAACAATTGATCCAGAGAAGGCGAAGGGAAAAATATTGGTTTGTAGTAGAGGCCAGACGGCAAGAGTGGAGAAGAGCTTTGTGGCTATGGAGGCTGGTGCAGTTGGAATGATTCTTTGCAACGATGAGGCCAGTGGTAATGAGATCATCGCTGATCCTCATTTCCTTCCAGCATCACAGCTCACTTATGAAGATGGCCTGCAAGTTTTTGCATACCTCAATTCTTCCAAGAATCCGATGGGATATATTGCTCCACCGGAAACCAAGTACCATGTGAAACCTGCTCCATTCATGGCATCATTCTCTTCCAGAGGGCCTAACAAAATCACACCTGAGATCCTTAAGCCTGACATCACGGCCCCCGGAGTCAATATCATTGCTGCATATTCGGAAGCAGCTAGCCCCACAGAAATGCCCTATGATAAGCGCAGGGTTCCATTTATCATAATGTCTGGAACATCTATGTCCTGCCCTCACGTCGCCGGAATCGCCGGTCTTCTCAAGACACTCCACCCTGAATGGAGTCCATCAGCTATCAAGTCCGCCATCATGACCAGCGCTAGGACAAGGGACAACAAGGGTGAGCCAATGCGTGATGGGACGGATTTTAAAGAAGCAACACGGTATGCATATGGTTCTGGTCACGTGAGACCAAATCGCGCCATGGACCCTGGCTTGGTCTACGATACAACCATAGATGATAACCTCAACTTCTTATGTGCCCTTGGTTACAATCAGAACCAGATCATGGCATTCTCCGGGGCTCGTCATCATGAGTGCCCTGATGCAATGAGCGTCTTGGATTTCAACTACCCTACAATAACGGTTCCGACGCTGTATGGTTCAGTTAATGTGACACGCAGGGTGACGAATGTGGGTTCGCCAGGGACTTACTTTGCAAGGCTCCACACTCCTTCGGGGCTTTCCATTTCCGTGACTCCCAAAGTGTTGAAGTTTGAGAGCGTGGGTGAAGAGAAGAGTTTTAAAGTCGCAATGGAGGTTACTAAGCCAGGTCCCTCTATAGGCTATGCGGTCCTGACTTGGTCCGATGGAAAGCATTATGTCAGGACTCCAATCACCGTTGGTGGAATCAAGGGCAACAAGGGTTAA 2286 0.4681 MSTVKQLQMLILIELPKLIMIFLDPIWEAQEAMIYSYTRHINGFAAMLRDEEAAEIAKHPKVVSVFLNKGRKLHTTRTWEFMLMEKQSGVISPASVFSKAKFGEDTIIGNFDTGVWPESPSFRDGGIGPIPSRWKGSCEGGSPDFHCNRKLIGARYFNKGYAANVGASVLKNGTLNTVRDYEGHGSHTLSTLGGNFVPGANVFGFGNGTAEGGSPKARVATYKVCWPPVNGSQCFDADIMAAFDMAIHDGVDILSLSLGGDPVDYIEDGLAIGAFHAFRKGITVVCSGGNSGPKPGSISNVAPWVFTVAASTLDREFDSVVELENGKNFTVTNTTLEKRFNFLFHINSNLIYTFQGASLSNAMPQKKFYPLINGLDAKLANATDGDAILCKIGTIDPEKAKGKILVCSRGQTARVEKSFVAMEAGAVGMILCNDEASGNEIIADPHFLPASQLTYEDGLQVFAYLNSSKNPMGYIAPPETKYHVKPAPFMASFSSRGPNKITPEILKPDITAPGVNIIAAYSEAASPTEMPYDKRRVPFIIMSGTSMSCPHVAGIAGLLKTLHPEWSPSAIKSAIMTSARTRDNKGEPMRDGTDFKEATRYAYGSGHVRPNRAMDPGLVYDTTIDDNLNFLCALGYNQNQIMAFSGARHHECPDAMSVLDFNYPTITVPTLYGSVNVTRRVTNVGSPGTYFARLHTPSGLSISVTPKVLKFESVGEEKSFKVAMEVTKPGPSIGYAVLTWSDGKHYVRTPITVGGIKGNKG 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02456 761 Gene3D - 631 755 - -
Aip01g02456 761 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 74 IPR037045 -
Aip01g02456 761 Pfam PA domain 390 460 IPR003137 -
Aip01g02456 761 Pfam Subtilase family 103 592 IPR000209 GO:0006508|GO:0008236
Aip01g02456 761 PANTHER BNAC02G33520D PROTEIN 22 753 - -
Aip01g02456 761 SUPERFAMILY Subtilisin-like 92 618 IPR036852 GO:0004252|GO:0006508
Aip01g02456 761 Pfam Fibronectin type-III domain 660 753 IPR041469 -
Aip01g02456 761 Gene3D - 314 482 - -
Aip01g02456 761 CDD Peptidases_S8_3 72 579 IPR034197 -
Aip01g02456 761 SUPERFAMILY PA domain 383 468 IPR046450 -
Aip01g02456 761 CDD PA_subtilisin_like 353 475 - -
Aip01g02456 761 Pfam Peptidase inhibitor I9 29 74 IPR010259 -
Aip01g02456 761 Gene3D Peptidase S8/S53 domain 105 626 IPR036852 GO:0004252|GO:0006508
Aip01g02456 761 ProSiteProfiles Serine proteases, subtilase domain profile. 78 614 - -
Aip01g02456 761 PRINTS Subtilisin serine protease family (S8) signature 543 559 IPR015500 -
Aip01g02456 761 PRINTS Subtilisin serine protease family (S8) signature 180 193 IPR015500 -
Aip01g02456 761 PRINTS Subtilisin serine protease family (S8) signature 103 122 IPR015500 -
Aip01g02456 761 ProSitePatterns Serine proteases, subtilase family, serine active site. 544 554 IPR023828 -
Aip01g02456 761 PANTHER PEPTIDASE S8 22 753 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02456 Aip-Chr1 124163669 124166933 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02456 29 753 Subtilisin-like Serine Gene Family AT5G59810 59.697 0.0 879
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02456 - - ahf:112722783 1423.3