Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02446 ATGCGAATGGTGATTGAGGATGTCGATATATCACCGGCAAGAGCGGCGGATGTGGTCACGGAGACGGTTGCGAGCAAAGCGGAGCAGGCGGCAGGGCTGGGAATTCTGCTGCAGATCATGATGCTGGTGCTGGCCTTCGTGCTTGGCCATGTCCTCCGCCGCAAGAAGATTTACGTGGTTCCGGAGGCCAGCGCCTCCCTCCTCATCGGCCTGCTTGTCGGCGTCCTCGCCAACATCTCCCACACTCAGACCAGCATCAGAGCCTGTTTCCTTGGTGGATTTATACACCTCGTGTACGGACTACCTTTCGTTGAGTGCCTAATGTTTGGTGCTCTTATCTCTGCAACTGATCCAGTTACCGTTCTCTCCATATTTCAGGAGCTTGGCACTGATGTCAATTTGTATGCCCTGGTTTTTGGAGAGTCTGTTCTGAATGATGCTACTTCCCTCCAACTAGAACACTTACTTTTCAGAACAATGTCACTGGTTAAAACTCATCCATCTGGACAGAACTTATTCATGGTGGTTGTTAGATTCTTGGAGACTTTTGTTGGGTCGATGTCTGCTGGTAAATTGAGGAACCTTAACTCTCAGAACCTATTTAAGTATGCAGGATTGAGTATTGACAGCCTTCAGAACTTGGAGAGCTGTCTTTTTGTACTTTTCCCATATTTCTCGTACATGCTTGCAGAAGGTCTTGGCTTGTCTGGTATTGTATCAATATTGTTCACGGGAATGGTCATGAAGCACTACACGTATTCAAACTTGTCTAGAAGTTCTCAGAGATTTGTCTCTTCTTTCTTCGAGTTAATATCATCATTAGCAGAGACATTTGTATTTATATACATGGGGATTGATATTGCCATGGAGAAACATAGCTGGTCACATGTTGGATTTATTTGCTTCTCAGTTATATCCATTGGAATTGCAAGGGCGGCCAATGTCTTTTGTTGCGCATATCTGATCAACTTAGTCAGACCTCAACAGCAAAAGATACCACCAAAGCACCAGAAAGCACTATGGTATAGTGGACTTCGAGGAGCAATGGCCTTTGCCCTTGCTCTACAATCAGTTCATGATCTTCCTGAAGGACATGGGCAGACCATATTCACTGCAACTACAGCAATTGTCATGTTGACGGTATTGCTGATTGGTGGTTCAACAGGTACCATGCTGGAAGCTTTAGAAGTTGTAGGTGGTGAAATTAATAGCAAGGAGAGCCCTTTGCCTTCAGGTGAGATCACAAAGcttgccatcgagtcactgcatgccgtcgtatctgctctcgccgtcgtgtcgccgatcgctgccAGAACTGGGTCGCCGGTCGCTGCCGTTTTGGGTGCAGCAAAAGCTCTTGGTCAAATCAAACCTCTTGGAGTTGAGGTTCATTTTGTAGTTGCAGCTTGTAAGAATATGATTAGTGGAAAAGGTATGAGGCCTGGAGACATTGTCACAACTTCAAATAGAAAGACTATAGAGGTTAACAACACTAATGCGGAGGGTAGGCTTACCTTGTTATGTAATAGAAACTCTGTTTTGTGTTGTAAATGGTTTGGTCTAATTTGA 1569 0.4302 MRMVIEDVDISPARAADVVTETVASKAEQAAGLGILLQIMMLVLAFVLGHVLRRKKIYVVPEASASLLIGLLVGVLANISHTQTSIRACFLGGFIHLVYGLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDATSLQLEHLLFRTMSLVKTHPSGQNLFMVVVRFLETFVGSMSAGKLRNLNSQNLFKYAGLSIDSLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGMVMKHYTYSNLSRSSQRFVSSFFELISSLAETFVFIYMGIDIAMEKHSWSHVGFICFSVISIGIARAANVFCCAYLINLVRPQQQKIPPKHQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVMLTVLLIGGSTGTMLEALEVVGGEINSKESPLPSGEITKLAIESLHAVVSALAVVSPIAARTGSPVAAVLGAAKALGQIKPLGVEVHFVVAACKNMISGKGMRPGDIVTTSNRKTIEVNNTNAEGRLTLLCNRNSVLCCKWFGLI 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02446 522 Pfam Sodium/hydrogen exchanger family 83 393 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Aip01g02446 522 Gene3D Zn peptidases 440 507 - -
Aip01g02446 522 PANTHER SODIUM/HYDROGEN EXCHANGER 6 89 401 - -
Aip01g02446 522 PANTHER SODIUM/HYDROGEN EXCHANGER 6 16 88 - -
Aip01g02446 522 Pfam Cytosol aminopeptidase family, catalytic domain 444 506 IPR000819 GO:0006508|GO:0070006
Aip01g02446 522 PANTHER SODIUM/HYDROGEN EXCHANGER 89 401 IPR018422 GO:0006812|GO:0015299|GO:0016021
Aip01g02446 522 PRINTS Cytosol aminopeptidase signature 433 454 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Aip01g02446 522 PRINTS Cytosol aminopeptidase signature 493 513 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Aip01g02446 522 PRINTS Cytosol aminopeptidase signature 471 492 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Aip01g02446 522 SUPERFAMILY Zn-dependent exopeptidases 444 506 - -
Aip01g02446 522 PANTHER SODIUM/HYDROGEN EXCHANGER 16 88 IPR018422 GO:0006812|GO:0015299|GO:0016021
Aip01g02446 522 Gene3D - 103 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02446 Aip-Chr1 124082460 124088160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02446 105 395 Antiporters AT3G05030 35.082 2.17e-34 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02446 K14724 - dcr:108227751 523.087