Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02419 ATGGAACTTTCGAGTCAAGAAGGAGATATACCAATCGCAGTAAACACCACCGCCAATTATGGTGGCAATGGCCATGGCGCCCACATCAACATTCACCACACCCAAAACCCTTCCAATGGCTCCTCTATGCACCCGCTCGACAATGGACCCTACAATAGCAAGCAGGAGGAGGAAGAGGAGGAGGAGGTGGTGGTGCCGCTCGTCAGGTACAGAGAGTGCCTCAAGAACCATGCCGCCGCCATGGGAGGAAATGCCACCGACGGTTGTGGCGAGTTCATGCCAAGCGGAGACCACGGCACCATGGAAGCCCTCACCTGCTCCGCCTGCCGCTGCCACAGAAACTTCCACCGAAAGGAAATCCAAGGCGAGCCTTCAGCCCCACCCCCGCCCTTGCTGGAGTACCACCACCACCACTTCAACACCGCCACCAGGCACCTCGCCGCTTCTAGAAAGTTCCTTCACAAGAACATGCACCATCATCATCATCTCGGTTACCCTACTGCTGGCGGCGGTAACATCCTTCCGTCGAGAACGGTGCCCCCGGCGCAGATGATAATGCCCTACAACATAGGCCCCATGCCGTCGTCGGAGCACTCGGACGAGCAGGACGAGCGGGTGAAGACTGCAACGAGATTGGAGTCAAACGCAGAGTCCTCAAGGTGA 663 0.5762 MELSSQEGDIPIAVNTTANYGGNGHGAHINIHHTQNPSNGSSMHPLDNGPYNSKQEEEEEEEVVVPLVRYRECLKNHAAAMGGNATDGCGEFMPSGDHGTMEALTCSACRCHRNFHRKEIQGEPSAPPPPLLEYHHHHFNTATRHLAASRKFLHKNMHHHHHLGYPTAGGGNILPSRTVPPAQMIMPYNIGPMPSSEHSDEQDERVKTATRLESNAESSR 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02419 220 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 4 6 205 - -
Aip01g02419 220 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 6 205 - -
Aip01g02419 220 MobiDBLite consensus disorder prediction 163 220 - -
Aip01g02419 220 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 70 119 IPR006456 -
Aip01g02419 220 Pfam ZF-HD protein dimerisation region 68 120 IPR006456 -
Aip01g02419 220 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 69 120 IPR006456 -
Aip01g02419 220 MobiDBLite consensus disorder prediction 197 211 - -
Aip01g02419 220 MobiDBLite consensus disorder prediction 24 60 - -
Aip01g02419 220 MobiDBLite consensus disorder prediction 24 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02419 Aip-Chr1 123726289 123727248 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02419 1 206 ZF-HD Transcription Factor Family AT1G14440 37.805 3.26e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Aip01g02419 ZF-HD_dimer 4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02419 - - adu:107465625 328.176