Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02395 ATGGCTTGTTTGAAACCTGATGAGTTGGAGCTTGTTGGTAGAGGAGAGCAAGGTTCTCATCATGCTATGGAAAGAATTGGTGATGCTAATGTTGGTTCCAACAACAACAACATGGCTGATGATGCTTCTATGATGCATTTTCCTGCTAACTGGCCAATGCCAGCATCTGGACTGAATGCATCAGCTCCAACTCATTTTACCATCTTATTCAATGGGAACACTTTTGTCTATGATGGAATTAATACAGAGAAGGTGCAAGAGATAATGCTTATTGCTGCTGCATATGCCAAGTCTGCTGAAGTGAAAATTGGGACACAATCTTCATTCACTCCACTCATTCCCACTTCCACAAGTTCTTCTCCTGCACAAAGAAATTCCAACAACTTGCCTTCAAAACAATCTGTGTGCTTTCCTGCAGAAAAGAGTTCCATTTGCAGGCTGCAAGAATTTCCGTTAGCACGTAGACAATCTCTTCAGAGGTTTCTTGAGAAGCGACGAGTCAGGTTGTTTAGCAAAGCCCCTTATGGTTTCTCAAAAAACATGGCTGGCCTCTATGATGACAATAGTCCAGGGAACATAGAGAACAGCTTTTATGATGACAATAGTCCACAAGATTTTGCTTCTTAA 627 0.4163 MACLKPDELELVGRGEQGSHHAMERIGDANVGSNNNNMADDASMMHFPANWPMPASGLNASAPTHFTILFNGNTFVYDGINTEKVQEIMLIAAAYAKSAEVKIGTQSSFTPLIPTSTSSSPAQRNSNNLPSKQSVCFPAEKSSICRLQEFPLARRQSLQRFLEKRRVRLFSKAPYGFSKNMAGLYDDNSPGNIENSFYDDNSPQDFAS 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02395 208 PANTHER DIVERGENT CCT MOTIF PROTEIN 18 183 - -
Aip01g02395 208 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 18 183 IPR040390 -
Aip01g02395 208 ProSiteProfiles Tify domain profile. 59 94 IPR010399 -
Aip01g02395 208 SMART tify_2 59 94 IPR010399 -
Aip01g02395 208 MobiDBLite consensus disorder prediction 112 131 - -
Aip01g02395 208 Pfam tify domain 61 93 IPR010399 -
Aip01g02395 208 Pfam Jas motif 151 175 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02395 Aip-Chr1 123324408 123328145 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02395 63 175 Tify Gene Family AT5G20900 43.860 2.02e-21 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Aip01g02395 tify 3.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02395 K13464 - gmx:100306655 141.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02395 01 123324408 123328145 Aip03g02735 03 53832552 53837332 PCT