Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02393 ATGGCTACGCCGAATCCAGTAACAGCAGCAGCACCACCAGCATGTCCAGCACCAATGAAAGCCACGTCCAATGGGGCGTTCCACCATGAAAATCCTCTTGACTATGCTCTTCCATTGCTAATTGTTCAAATATGTATCGTTGTTGGCTTCACCAGATTCCTTGCATTCCTTTGCAAACCCCTTAGACAGCCTAGAGTTATTGCAGAGATCATCGGAGGATTACTGCTAGGACCATCTGCATTTGGACGAAACCAGAAGTTCCTAAACACAATCTTTCCAAAGAAGAGCTTAACAGTTCTGGACACCATAGCCAATGTAGGTCTCTTGTTCTTCTTGTTTCTCGTTGGTCTTGAGCTTGATGTCCGCTCCATTAAGCGTACTGGGCCAAAGGCCTTAGCCATTGCCGTGTGCGGCATCACTTTCCCTTTCCTTCTCGGCGTTGGAACCTCTTTTGTTCTCAGAGCAACCATCTCACAAGGTGTTCAGCCACTTGCCTTCATTGTTTTCATGGGCGTGGCTCTATCTATCACTGCCTTCCCTGTCTTGGCTCGAATCCTCGCCGAGCTCAAGCTTCTAACCACTGATGTTGGAAGCATTGCCATGTCTGCGGCTGCAGTGAATGATGTTGCAGCATGGATACTCTTAGCTCTTGCAATAGCTGTCTCCGGTGACAACACTTCTCCGATAATCTCTCTTTGGGTTCTGCTTTGTGGTGCCGGTTTTATACTCTTTGCTGTGTATGGCATAAGGCCTTTGCTGGTGATAATGGCGAAGCATTCGCTGTCTGGGGAGCCGGTTAAAGAGACCTACATATGCTTCACGTTGACGTTGGTTTTGGCTTGTAGTTTTCTGACCGATACAATTGGTATCCATGCTCTGTTTGGTGCATTTGTGGTTGGTATAATTGTCCCAAAAGATGGTCCTTTTGCTGGGGTTTTGATTGAGAAGATTGAAGACTTGGTCAGTGGGATTTTCTTGCCACTATATTTTGTGTCTAGTGGGTTGAAGACAAATGTGGCTACTATTAGTGGAGGCACTTCTTGGGCATTGCTTGCACTTGTTATTTTCAATGCTTGCTTTGGAAAGATTGTTGGCACTGTTGTGGTGTCACTCTCATGTAAGGTGCCTTTTAGAGAATCATTGGCACTTGGCTTTCTCATGAACACTAAGGGTTTGGTAGAGCTCATTGTTCTTAACATTGGAAAGGATCGCAAGGTGCTGAACGACCAAGCATTTGCAATTTGTGTTCTGATGGCACTTTTCACCACCTTCATCACGACCCCAATAGTGATGGCAGTGTACAAGCCAGCTCGGAGAGGAGCACCATACAAACACAAAACAATCCAGCGCAAGGATCTGGACACAGAGCTGAGGATGCTGGCATGTTTCCACAGCACACGCAGCATCCCAACCTTGCTGAACCTCATCGAATCTTCCCGCGGAACCAAGAAGTTTGGGAAGCTTTGCATTTACGCCATGCACCTTATGGAGCTCTCAGAGCGCTCCTCTGCCATCACTATGGCCCACAAGGCACGCAGGAACGGCCTTCCTTTCTGGAACAACAAACCCGACGACGCCAACGGCAACAACGATCACATGATCATTGCTTTCCAGGCTTACGGAAAACTCAACAAGGTTAACGTTCGTCCCATGACTGCTATCTCTGATCTCGCTAACATCCATGAAGATATCTGCACTAGCGCTCACCAAAAGCGTGCTGCAATGATCGTCCTTCCATTCCACAAGCACCAACTCGTTGATGGATCCATGGAGTCTCTGGGAAGCTCGTTCCGTCACATGAACGAGCTTGTTTTGAGCCACGCTCCTTGCTCTGTAGGGATCTTGGTTGACCGTGGACTAGGCGGCGCAAGCCAGGTTCAAGCATCTGACGTGTCATACAACATAGTTGTGTTGTTCTTCGGTGGACGTGATTGTAGAGAAGCACTTTCTTATGGTATGAGGATGGCACAGCACCCGGGTATCTCGCTGACGGTTGTTAAGTTTGTTACAGCACCGGGGAAGAGCCTGGCCTTCGGGGCGAAGCTTGTCGCTGTGTCAGTAGACAAGCAACAGAAAGTGGTTACAGAGATTGATGAAAACGAAAAACAGTTAGACGAGGAGTTGTGGAACGAGTTCTTGGGGAAGTCAATCAAGTATGAGGAGAGACTAGTGGATAGCCGAAACGACATTGAGGCTGCTTTGAGGGAGATGAGTAGGTCCAGCCTTATTTTGGTTGGTAGAATGCCATCCGTTGCACCCTTGGTTTACAACAGTGACTCTGCTCAACTTGGCCCTGTTGGAAGCTTCTTGGCTTCTTCGGAATTCTCAACCACCGCGTCTGTTGTTGTCATCCAACAGTATAATCCAGCTGCTGATGCTCACCCACTCGTCATGGAGGAAATTGATCAACTTGAGGAGCCTGATACCCCGCTCTGA 2436 0.4811 MATPNPVTAAAPPACPAPMKATSNGAFHHENPLDYALPLLIVQICIVVGFTRFLAFLCKPLRQPRVIAEIIGGLLLGPSAFGRNQKFLNTIFPKKSLTVLDTIANVGLLFFLFLVGLELDVRSIKRTGPKALAIAVCGITFPFLLGVGTSFVLRATISQGVQPLAFIVFMGVALSITAFPVLARILAELKLLTTDVGSIAMSAAAVNDVAAWILLALAIAVSGDNTSPIISLWVLLCGAGFILFAVYGIRPLLVIMAKHSLSGEPVKETYICFTLTLVLACSFLTDTIGIHALFGAFVVGIIVPKDGPFAGVLIEKIEDLVSGIFLPLYFVSSGLKTNVATISGGTSWALLALVIFNACFGKIVGTVVVSLSCKVPFRESLALGFLMNTKGLVELIVLNIGKDRKVLNDQAFAICVLMALFTTFITTPIVMAVYKPARRGAPYKHKTIQRKDLDTELRMLACFHSTRSIPTLLNLIESSRGTKKFGKLCIYAMHLMELSERSSAITMAHKARRNGLPFWNNKPDDANGNNDHMIIAFQAYGKLNKVNVRPMTAISDLANIHEDICTSAHQKRAAMIVLPFHKHQLVDGSMESLGSSFRHMNELVLSHAPCSVGILVDRGLGGASQVQASDVSYNIVVLFFGGRDCREALSYGMRMAQHPGISLTVVKFVTAPGKSLAFGAKLVAVSVDKQQKVVTEIDENEKQLDEELWNEFLGKSIKYEERLVDSRNDIEAALREMSRSSLILVGRMPSVAPLVYNSDSAQLGPVGSFLASSEFSTTASVVVIQQYNPAADAHPLVMEEIDQLEEPDTPL 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02393 811 Gene3D - 39 441 IPR038770 -
Aip01g02393 811 PANTHER CATION/H+ EXCHANGER 3 12 808 - -
Aip01g02393 811 PANTHER CATION/H + ANTIPORTER 12 808 - -
Aip01g02393 811 Gene3D - 535 749 - -
Aip01g02393 811 Pfam Sodium/hydrogen exchanger family 46 429 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02393 Aip-Chr1 123295081 123298188 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02393 15 803 Antiporter Super Family AT3G17630 69.066 0.0 1072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02393 - - lang:109362195 1236.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02393 01 123295081 123298188 Aip01g02393 01 123295081 123298188 ECH