Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02392 ATGGAAGCTTATGTGGCAATATTAGCAAAGATAACTTATCTTGTTGCCCTGCTTTTTCTGGTAATAGGGTTGTGCACCCCAATTGTTGTTGAGGCCAAACATGTGAGCATCAAGAACAGGCTAGGATCTGGGAAGAACATGACCCTGCATTGTAAATCCAAAGATACTGATCTGGGTGAGCATAGTATAGCATATGGGGATGAGTTTGGGTGGGACTTCCATGACGACGTTGTCGGAACCACACTCTTTTACTGTGATTTGGAGTGGGAGAGAGTTCAGGAGTACCATTTTGATGCCTATGACTTCCACAGGGACTTTGTCCGATGCGGCGGTGATGGATGTTCATGGCTGATATCTGCTGAAGGCATGTATGGTTCAAATAGTCAAACAGGGCTCTGGGAATTCATGTACTATTGGCCAAACTGA 426 0.4507 MEAYVAILAKITYLVALLFLVIGLCTPIVVEAKHVSIKNRLGSGKNMTLHCKSKDTDLGEHSIAYGDEFGWDFHDDVVGTTLFYCDLEWERVQEYHFDAYDFHRDFVRCGGDGCSWLISAEGMYGSNSQTGLWEFMYYWPN 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02392 141 PANTHER PUMILIO HOMOLOG 15-LIKE 25 124 - -
Aip01g02392 141 Pfam Plant self-incompatibility protein S1 34 139 IPR010264 -
Aip01g02392 141 PANTHER - 25 124 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02392 Aip-Chr1 123288764 123289205 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02392 35 139 Carbohydrate Esterase AT3G16970 34.259 7.72e-13 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02392 - - gmx:102670225 211.846