Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02387 ATGTTGAAAAGAAGCAACAGTTTTGGAGCCATGAGGATGCTATGCTGGGGGTTTGGGTTTATAGGGTTCATGTTTGTGAAATTGGTACAAGGATTTGAGAATGGTAATGTCACAGATATGCTGTATTTCAATAATAACAGACCTTTGATGGTTGGTCTTACTCTTATTTATGGTGCTGCCGCCAAAGGAGCTGTATGTCTTGATGGATCTTTACCAGGTTACCACTTCCACCGCGGATATGGCGCCGGATCAAACAGTTGGCTCATACAATTGGAGGGAGGAGGCTGGTGTGGAAATGTCAGAAATTGCATTTATAGTAAGAAGACGCGGCATGGTTCGTCGGCGTTTATGGAAAAACAGATACCATTTGTTGGGATATTAAGCAACAAAGCTTGGGAAAACCCAGATTTCTACAATTGGAATAGAATAAAAATTCGTTATTGTGATGGTGCATCATTTACTGGAGACAGTCAAAATGAGCGAGCAGGGTTGTTTTTCAGAGGGCAACGCATCTGGCTCGCTGCTATGGAAGATCTAATGTCGAAAGGAATGCGCTATGCTAAGCAGGCTCTTCTATCTGGATGTTCTGCAGGAGGTTTGGCAACTATTCTACATTGTGATGAATTCAAGGAAATGTTCCCAAGAACCACAAGAGTAAAGTGCTTAAGTGATGCTGGATTGTTCCTTGACGCTGTTGATGTATCCGGCCATCGCAGTTTGAGGAATTTGTTTGGAGGTGTGGTTGCCTTACAGGGAGCACAAAGAAACCTTCCGAGGACTTGTACCAGTCGCCTCAATCCAATTTTGTGCTTTTTCCCTCAGCACTCAATTGCCAGTGTTAAGGCACCACTGTTTCTTCTCAATGCAGCTTATGATACTTGGCAGATTCAAGCAAGTCTAGCTCCGCCATCTGCTGACTATCACTGGAATTGGTATGATTGCAGAAAAAATTACGCGCGATGCAGCGCGCCTCAGATGCAATATCTGCAAGGTTTTCGGAATCAGATGCTAAGAGCTGTAAGAAGATTCTCGAAGTTGCGTAAAAACGGGTTATTCATAAATTCTTGTTTTGCTCATTGCCAGTCCGAAAGACAGGATACATGGTTTGCTCGCGACTCTCCCCATATTGGAAATCGAGGGATAGCACAGTCTGTTGGGAACTGGTATTTCGATCGAGTTCAAGTTCAGGCCATTGGTTGTCCTTACCCTTGTGACAAAACCTGCCATAATTTGGTTTTCAACTGA 1245 0.4369 MLKRSNSFGAMRMLCWGFGFIGFMFVKLVQGFENGNVTDMLYFNNNRPLMVGLTLIYGAAAKGAVCLDGSLPGYHFHRGYGAGSNSWLIQLEGGGWCGNVRNCIYSKKTRHGSSAFMEKQIPFVGILSNKAWENPDFYNWNRIKIRYCDGASFTGDSQNERAGLFFRGQRIWLAAMEDLMSKGMRYAKQALLSGCSAGGLATILHCDEFKEMFPRTTRVKCLSDAGLFLDAVDVSGHRSLRNLFGGVVALQGAQRNLPRTCTSRLNPILCFFPQHSIASVKAPLFLLNAAYDTWQIQASLAPPSADYHWNWYDCRKNYARCSAPQMQYLQGFRNQMLRAVRRFSKLRKNGLFINSCFAHCQSERQDTWFARDSPHIGNRGIAQSVGNWYFDRVQVQAIGCPYPCDKTCHNLVFN 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02387 414 Pfam Pectinacetylesterase 46 393 IPR004963 GO:0016787
Aip01g02387 414 PANTHER PECTIN ACETYLESTERASE 18 413 - -
Aip01g02387 414 PANTHER NOTUM-RELATED 18 413 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02387 Aip-Chr1 123168703 123174184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02387 43 413 Carbohydrate Esterase AT1G57590 69.272 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02387 K19882 - gmx:100791571 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02387 01 123168703 123174184 Aip01g02387 01 123168703 123174184 ECH
Aip01g02387 01 123168703 123174184 Aip06g00797 06 10603464 10608080 ECH
Aip01g02387 01 123168703 123174184 Aip09g01418 09 25146522 25150759 ECH