Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02383 ATGAAGCCCGTAATGAACATGTTCCATGTGGGGACGGTGGCGCAAGCAATAGTAATTTTGGTAAAAAAAAGTGAATACGTTGTCGTTTTGGAAAACCCCCGATGCCTTAATGTGACAATGTGCATCCACCCATGGAGGCTTGGAGGCTGTCCTCATCCCTCATTGTTTGTGTTGTTTGTGTATGTATTTTCTATGACTGTGTCCTTCAAGATATGGAACCCCGATAACGGCGGAGACCTTGTTTATCTCACATGCCTGATCGCACGAGTTGGCACCGTAGATTGTGGCTCATGTGTAATGCATATGGTGTTTTTGGATGTTTGTGTTTGTAGTTGGCAAGTGGAGGCTATGAGGATGTTGGAAGCAGGTTGGATAGTAGATGAGGTGGTAATAATGGCATCAAGTAGCCAGTTTTGCAAGGATGCGTGTATGTGGAATGAGCCTCTTGCGGATTACTGGATGGAGGGCAATGCGGTTGGTTGTACTCTTAGCAGCTGTGAGGGTTATGTTGCGAGAACTGATATTTTATGTGCTGACTATGATGTCACGAGTCTGATACGTAGAAGAAATGAGGAAGATGCCGAGTTATCCGATTGGGAAGGAAGGGGGGATTCTATGTTGCCCGGTTTTTTGGGTTTGGATGGGTTGCGAGTAGAAGATGTCCTCGAAATGGAGTTTTCAACACCTGAGGAGGCAGGCGGCTTCTATAACAACTACAGCCGACTAAAGGGCTTTGCATCAAGACGAGGGAAGATGGTTAGAAACACTGCCGGAGAGATCGTACGGTACACGTTTGTTTGTAATAGGCAAGGATTTCGAGAGAAGAAATGGTTGGAAAAGGTTGATCACAAAAGGGAGCATAAGGTAGTAACCCGATGCGGATGCCTGGCCGAGATGAGGATAAAGAGGAAAGACGGTAGTGGGAGGTGGTATGTCTCGCGTTTTGTCGAGGAGCATAACCACGAACTTGCGTATGGGAAGCTTGTTGATTATCTGCGGTCACACAGGAAGATATCTGAGATAGAAGTTTCTCAGCTAACAAGCATAAGGGAGATTGGGATTAGCATACCTAAGATTTATGAGTCTTTCACAGCCCAACTAGCGGGCTTTAATTTGGTAACATTCACGAAGCAAGATATGTATAATGAGATACGGAAACAGAGAGGTCTCCAAAGCGGAGATGTAAGTGCAGTTATTAGGTACTTGGAAGGTCTGGCACGCATGGATGGAAAAATGTTTTGGCGGTACAAGTTCGGGCAAGGCAACACCTGTGCAACTTGTTTTGGAGCGACGGTCATTGTCAGGAAGATTATGGGATATTCGGCGATGTGCTAG 1335 0.4584 MKPVMNMFHVGTVAQAIVILVKKSEYVVVLENPRCLNVTMCIHPWRLGGCPHPSLFVLFVYVFSMTVSFKIWNPDNGGDLVYLTCLIARVGTVDCGSCVMHMVFLDVCVCSWQVEAMRMLEAGWIVDEVVIMASSSQFCKDACMWNEPLADYWMEGNAVGCTLSSCEGYVARTDILCADYDVTSLIRRRNEEDAELSDWEGRGDSMLPGFLGLDGLRVEDVLEMEFSTPEEAGGFYNNYSRLKGFASRRGKMVRNTAGEIVRYTFVCNRQGFREKKWLEKVDHKREHKVVTRCGCLAEMRIKRKDGSGRWYVSRFVEEHNHELAYGKLVDYLRSHRKISEIEVSQLTSIREIGISIPKIYESFTAQLAGFNLVTFTKQDMYNEIRKQRGLQSGDVSAVIRYLEGLARMDGKMFWRYKFGQGNTCATCFGATVIVRKIMGYSAMC 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02383 444 Pfam FAR1 DNA-binding domain 235 324 IPR004330 -
Aip01g02383 444 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 218 362 - -
Aip01g02383 444 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 218 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02383 Aip-Chr1 123129923 123132538 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g02383 FAR1 2.1e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02383 - - aip:107620408 525.783