Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02379 ATGGAAGGCAAAATTGCATTAAAGAATTTGCTTCAAGTTCAAGAATTTGCATTGAATTCCACTCATGATTCCTCCTCTGTTAGTAATAATACTCTAGGATCTACTCTTTTGAGTTTGAGCTTGAATCCTCAACAAAATCAAGATCAGTCTCATACCCAATTGGAAGTGCTGAAAAAGAAGCTAGAGGAAGTGAAGAAGGAGAATCAGAATCTAAGAATTATGCTGAATCAGATTAGGGAACACTATGGAGTTCTTCAAAATCAGTTATTGCTGGCGATGCAGTGCCACCAATTATCTTCATCCTCGCCTACAATAATTAATCATGACCTCAAGAATGACAATAGAGAAGAAATGTTGGAGAGAAAAATGTTACCCACCACCCGGAAATTTGGTTTTGATGTTAAGAATGAAATGAGTAAGCACATAGCATCACAAGAAGCAAAAATATTGGAGGATCAACTACCATCATTTGAAGCTTCTTGTAATAAGAAAGCTAGAGTGTCCATAAGAGCAAGATCAAATTTTTCTATGATGGTTGATGGGTGCCAATGGAGAAAATATGGACAAAAAACATCAAAGGGCAATCCTTGTCCTCGAGCCTACTATCGTTGTAGCATGGGACAAACATGTCCAGTTCGTAAGCAGGTGCAAAGGTGTGCAATGGATGAGAGAGTTGTGATAACAACGTACGAGGGGAATCACAATCATCCACTCCCAGAAGCAGCAAGATCCATAGCCACCACAACAACATCAGCATTGAACATGTTCCTTTGTGGCTCCATGACCACCACCACAACTAGTAGTACATCACTTTCACTATCTTCTACTTCATCATCATGTCCTACTCTAACACTGGATTTAACTACTCAACAACCCTCCAATGATATTATTGCATCACAACAACCATTACTATTCCCTCTGCCTCTAAATGCTTCCTATACTCAAGAAAACAACCTTGCCTTGGTGGATCTTGTTACTGCAGCTTTAACCAACGATCCTTCTCTTAAGGAAGCATTACTTGCAGCTTTTTCCTCTCTCACTCACAATAATAACACCATAATCAATGAACATGTTTAG 1077 0.39 MEGKIALKNLLQVQEFALNSTHDSSSVSNNTLGSTLLSLSLNPQQNQDQSHTQLEVLKKKLEEVKKENQNLRIMLNQIREHYGVLQNQLLLAMQCHQLSSSSPTIINHDLKNDNREEMLERKMLPTTRKFGFDVKNEMSKHIASQEAKILEDQLPSFEASCNKKARVSIRARSNFSMMVDGCQWRKYGQKTSKGNPCPRAYYRCSMGQTCPVRKQVQRCAMDERVVITTYEGNHNHPLPEAARSIATTTTSALNMFLCGSMTTTTTSSTSLSLSSTSSSCPTLTLDLTTQQPSNDIIASQQPLLFPLPLNASYTQENNLALVDLVTAALTNDPSLKEALLAAFSSLTHNNNTIINEHV 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02379 358 Gene3D WRKY domain 162 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip01g02379 358 Coils Coil 47 81 - -
Aip01g02379 358 ProSiteProfiles WRKY domain profile. 173 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip01g02379 358 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 354 IPR044810 GO:0003700
Aip01g02379 358 SUPERFAMILY WRKY DNA-binding domain 172 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip01g02379 358 Pfam WRKY DNA -binding domain 180 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip01g02379 358 SMART WRKY_cls 178 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip01g02379 358 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02379 Aip-Chr1 123028114 123031014 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02379 57 288 WRKY Transcription Factor Family AT4G04450 37.829 3.17e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip01g02379 WRKY 8.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02379 - - ahf:112722714 432.18