Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02368 ATGGTCAGGGAAACAGTCTGCAGCACTAGTTTCGTAACCAAAGCCCCACCCACTTTGTCCGTAGAAAATGCGGCTGTCGCGTCTGCTTCCTCGATTCGAAGAGTGGTCGTTGCCGCCGACAGTTGCATAGGCTTGAACTGTGAACCGATAACTCCGATGGATTTCAAGCAGATGTTCGGAGCCAAAGCGGAAGACTCGGATGAGAACAGCTCTAATGGATATTGTGCCCGTTATTATGCCAGTGATGAAGAAGGTGACGAGGATGAAGGTGGTGAGTTCTGGAGAGACTTTTTCTGCCATCGACAAGGCACAAGACATCCTAAGCACTATGACCTTCCTGAGCGAGTTAGGGAGGAGAGGTTGGAAAGTCGAACCGACTGCAAGGCAAAGTTGAAGATTTACTATGATGTGCAACGCAGTGTGTGGAAGGTCAGGACCATCTTCGATGAGCACAACCACAAGCTTGCTCCGGCCATGTTTTCCTACCTCCTGCCTAGCCATCGGAAGATGAGTAATGGTGACAAAGCGCAAGTTGATAGCATGAAGCAATTTGGGATACCAACCTCAAAGATAATGGCTTACATGGCTGGTCAATCTGAAGGGTCTGGAATGCTGCGATTTACAAAGCGTGATTTGTATAATTACGTTCATGGGAAAAGACTGGCCTGA 669 0.4843 MVRETVCSTSFVTKAPPTLSVENAAVASASSIRRVVVAADSCIGLNCEPITPMDFKQMFGAKAEDSDENSSNGYCARYYASDEEGDEDEGGEFWRDFFCHRQGTRHPKHYDLPERVREERLESRTDCKAKLKIYYDVQRSVWKVRTIFDEHNHKLAPAMFSYLLPSHRKMSNGDKAQVDSMKQFGIPTSKIMAYMAGQSEGSGMLRFTKRDLYNYVHGKRLA 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02368 222 Pfam FAR1 DNA-binding domain 90 156 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02368 Aip-Chr1 122838948 122844793 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g02368 FAR1 2.4e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02368 - - ahf:112709549 248.054