Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02364 ATGACGTCCTCTACACGGCTTGGTGAGCTCCTCTATTCAGCAAACTCCGACAAAGCCAATGACGATGACCAAGATGACCTCCAATGCGCAATATGCTCCGACGAGGCCAATGAAGAAGATGACGGGCAGCTCCTCTATGCAGCAAGTTCCGGCAAGGTAAGCGACGAAGACGATGAGCAGCTCCTCAGCGCAGCGATCATTGACGGGGCCAACAACGGAGACGACAAGCGCACCGCCGAGGAGCTCGACCGCGACCGCAACCGTCTTGGTGGCGGCTTCAGGAACTACGGCAATGACCGCGCCAACAGAAGCTCCAGTGATGGTGATGATACCTCCAATTCGGTTCCAACAGCGGTTCTGGTGGTCTTGGGTTTGAAAGAGAGAGGAAGTGAGAGGAGTGAGGGTGGTGGTGGGAGACCTAGGCTTGTTTTGCAACCTCGTACAGCGCCTGTGAACAATGAGAGCCAGGAGGGTGCTGGTAATGGTAATGGTAATGTGGTGAAACCAAAGGGTCCAAGCCCATTCGGCGAGGTGAGACCGAGGGAAGAGGTGCTGGTGGAGAAGGGGCAGGATTGGAAGAAGATTGATGAGCAGCTTGAGAGCATGAAGATTAAGGAGGCTGTTGAGAAAAAAGAGAGTTTTGAAAAGAGGGGTTTTGGTTCTGGCAATGGACGTGAGGTAGTGTCTCAGCTCTCAGAAGAACCATGCAGCATTAGCGGAAGCTTCTCCACTGCTACCACAGTTACGGAGAAGAGAGAAGAAGAAGTAACCAGCAAAAGAAGCATCAGGGAGGGAACAACAACAATGATGATCATTCATAAGTGGAACAGTAACAGATCCCCGTCGAGGAAGCGCCCTCACGCCTGTGACGGAATTGTCGCCTCCGGGAGGGAGCAGAGTGTTGAGGAAGAAGGGGCCAGAGTGGGTATTGGAGAGTGA 939 0.5325 MTSSTRLGELLYSANSDKANDDDQDDLQCAICSDEANEEDDGQLLYAASSGKVSDEDDEQLLSAAIIDGANNGDDKRTAEELDRDRNRLGGGFRNYGNDRANRSSSDGDDTSNSVPTAVLVVLGLKERGSERSEGGGGRPRLVLQPRTAPVNNESQEGAGNGNGNVVKPKGPSPFGEVRPREEVLVEKGQDWKKIDEQLESMKIKEAVEKKESFEKRGFGSGNGREVVSQLSEEPCSISGSFSTATTVTEKREEEVTSKRSIREGTTTMMIIHKWNSNRSPSRKRPHACDGIVASGREQSVEEEGARVGIGE 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02364 312 MobiDBLite consensus disorder prediction 66 183 - -
Aip01g02364 312 MobiDBLite consensus disorder prediction 225 247 - -
Aip01g02364 312 Pfam Plant specific eukaryotic initiation factor 4B 135 204 IPR010433 GO:0003743
Aip01g02364 312 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 131 255 - -
Aip01g02364 312 MobiDBLite consensus disorder prediction 212 269 - -
Aip01g02364 312 MobiDBLite consensus disorder prediction 98 118 - -
Aip01g02364 312 MobiDBLite consensus disorder prediction 148 162 - -
Aip01g02364 312 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 131 255 IPR010433 GO:0003743
Aip01g02364 312 MobiDBLite consensus disorder prediction 73 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02364 Aip-Chr1 122800235 122805973 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02364 136 225 Eukaryotic Initiation Factors Gene Family AT4G38710 58.333 9.38e-21 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02364 - - aip:107612529 262.692