Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02362 ATGGTGATTTTGAGTCTTGGGAGGAGGGGGAATGAAAGAAGTGAGGAAGGGAAGGGAAGGCAACTTGGGAAATACGAGTTGGGAAGGACGTTAGGCGAGGGCAATTTCGGAAAAGTCAAGTTTGCAAGGGATACTCATTCTGGACATCCTTTTGCAGTTAAGATCCTTGACAAGAACAAGATCACCACCCTTAACGTCTCTGATCAGATAAAGAGGGAAATTGCCACACTCAAACTACTCAAGCATCCAAATGTTGTTAGATTATTCGAGGTCTTGGCCAGCAAAACAAAAATCTATATGGTACTTGAGTATGTGACAGGAGGGGAGTTATTTGACAAAATTGCATCCAAGGGTAAACTTTCTGAAACTGAAGGTAGGAAGTTGTTCCAACAGTTGATTGATGGTGTGAGCTATTGCCACAATAAAGGTGTCTTCCACAGGGATCTCAAGCTTGAGAATGTACTAGTGGATGACAAAGGAAACATTAAGATAACTGATTTTGGTCTTAGTGCTTTACCCCAACATTTCAGGGGAGATGGATTATTGCATACAACTTGTGGAAGTCCTAATTACGTCGCGCCGGAGATTCTTGCTAATAGGGGCTACAGTGGTGCAACATCAGATGCATGGTCCTGTGGTGTGATCTTGTATGTAATTCTAACAGGATACCTCCCATTTGATGACAGAAATCTTGCAGTTCTTTACCAAAAGATTTTGAAAGGAGATGTTCAGATACCAAAATGGCTTTCAGCCGGTGCCCAAAACATGATAAAAAAGATTCTTGATCCCAACCCTGAAACCCGAATAACAATGGCTGCGATCAAAGAAGATCCATGGTTCAAACAAGGATATGCTCCGGCAACTCATGAGGATGAGGAAGAGGACATATATATTGACAATGAAGCCTTTTCCATGAATGAAGTGCAACTAGACGCTGAGCAAAGGAGTCCACAATCACCAACTCTTATCAATGCATTTCAGTTGATTGGGATGTCGTCATGCCTCGACCTCTCTGGATTTTTTGAGAAAGAGGATGTCTCTGAAAGGAAGATAAGATTCACGTCCAACCTTTCGGCTAAAGATTTGGTAGAGAGGATTGAGGATATTGTGACGAAAATGGGATTTCAAGTCCAAAAGAAAAATGGCAAATTGAAAGTTATACAAGAGAACAAAACACACAAAACCCTTAGCAGCCTCTTAGCTGCGGCAGAGGTTTTTGAAATAAGCCCATCATTGCGTGAGGAAGCATTGCCTATATTCAAGAGGAGACTCTTAGGTGCCTTGCTGGAGTTTTCTGCTCAAGAATTGCAGGTTCAGATGGGTGATCCGTTAATTACCATTATATTTCACCATGGAGGGTCATTTATCACAGAGGCCGATGGGAGTATGTCTTACAACGGTGGAGAGACTTcacacaccagaaggaactgtccaaagagggctgctgccgaagaggctgctgctgcagaggctgcCGCTGCACAACCCACTGCTGCTACTGGTGGTGAAGGTCAGGCCAACTCTGCTGCCCCTGTCCCAGAAGCCCCAACCGAAATCAATCTTGACCAAAGTCAACCACCCTTGGAAGCAACTGATGACTCTCAACAGGTTCACGACCTTATATGA 1626 0.4151 MVILSLGRRGNERSEEGKGRQLGKYELGRTLGEGNFGKVKFARDTHSGHPFAVKILDKNKITTLNVSDQIKREIATLKLLKHPNVVRLFEVLASKTKIYMVLEYVTGGELFDKIASKGKLSETEGRKLFQQLIDGVSYCHNKGVFHRDLKLENVLVDDKGNIKITDFGLSALPQHFRGDGLLHTTCGSPNYVAPEILANRGYSGATSDAWSCGVILYVILTGYLPFDDRNLAVLYQKILKGDVQIPKWLSAGAQNMIKKILDPNPETRITMAAIKEDPWFKQGYAPATHEDEEEDIYIDNEAFSMNEVQLDAEQRSPQSPTLINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNLSAKDLVERIEDIVTKMGFQVQKKNGKLKVIQENKTHKTLSSLLAAAEVFEISPSLREEALPIFKRRLLGALLEFSAQELQVQMGDPLITIIFHHGGSFITEADGSMSYNGGETSHTRRNCPKRAAAEEAAAAEAAAAQPTAATGGEGQANSAAPVPEAPTEINLDQSQPPLEATDDSQQVHDLI 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02362 541 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Aip01g02362 541 ProSiteProfiles NAF domain profile. 318 342 IPR018451 GO:0007165
Aip01g02362 541 Pfam NAF domain 320 379 IPR004041 GO:0007165
Aip01g02362 541 CDD CIPK_C 324 412 - -
Aip01g02362 541 Pfam Protein kinase domain 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02362 541 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Aip01g02362 541 Gene3D Kinase associated domain 1, KA1 318 413 - -
Aip01g02362 541 CDD STKc_SnRK3 24 279 - -
Aip01g02362 541 ProSiteProfiles Protein kinase domain profile. 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02362 541 MobiDBLite consensus disorder prediction 466 541 - -
Aip01g02362 541 Gene3D Phosphorylase Kinase; domain 1 9 104 - -
Aip01g02362 541 MobiDBLite consensus disorder prediction 518 532 - -
Aip01g02362 541 SMART serkin_6 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02362 541 SUPERFAMILY Protein kinase-like (PK-like) 22 325 IPR011009 -
Aip01g02362 541 PANTHER - 15 412 - -
Aip01g02362 541 PANTHER CBL-INTERACTING PROTEIN KINASE 21 15 412 - -
Aip01g02362 541 Gene3D Transferase(Phosphotransferase) domain 1 105 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02362 Aip-Chr1 122742968 122757422 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02362 88 412 CBL-interacting serine-threonine protein kinases AT3G17510 71.166 4.35e-162 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aip01g02362 Pkinase 1.9e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02362 K07198 - twl:120011929 658.677