Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02323 ATGAAGATTGCTATGAGTTCAAGTCTTCATGGAAGTTGGCACATATTCTCCTTAAACATTAAAGCATCAAATATTCTTTTGATAGAAGGTTTTGAACCTCAGATATCTGATTTTGGATTAGTAAAATGGCTTCCATCTCAATGGAGTCATCATTCAATTGGCCCAATAGAAGGGACATTTGGTCATTTGGCACCAGAATATTATCTACATGAAGTTGTGGATGAGAAGGCAGATGTATTTGCTTTTGGAAATGTGTTAAGGGGTACTGCACTTGGAGAGTTGGAACCAAAGGAGGAAGATAATAAAGGAGTTCTGTGGATGAAGCTTGTGGTGAAGAAGAGTGAGCTAAAGCAGTTAGTGGAATCCATTAATGCAGCACATCATAGAACAATGTCTTCTTCTTCTTTAAGTGATGAACAACGGTTGAATCATTTTGTACGGAAGAAGCATGCATCTTACAGCAGCAAGTAG 471 0.38 MKIAMSSSLHGSWHIFSLNIKASNILLIEGFEPQISDFGLVKWLPSQWSHHSIGPIEGTFGHLAPEYYLHEVVDEKADVFAFGNVLRGTALGELEPKEEDNKGVLWMKLVVKKSELKQLVESINAAHHRTMSSSSLSDEQRLNHFVRKKHASYSSK 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02323 156 ProSiteProfiles Protein kinase domain profile. 1 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02323 156 SUPERFAMILY Protein kinase-like (PK-like) 9 106 IPR011009 -
Aip01g02323 156 Gene3D Transferase(Phosphotransferase) domain 1 6 149 - -
Aip01g02323 156 PANTHER OS08G0249100 PROTEIN 15 122 - -
Aip01g02323 156 Pfam Protein kinase domain 12 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02323 Aip-Chr1 121567807 121570260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02323 13 136 Receptor kinase-like Gene Family AT5G39000 35.115 1.68e-16 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Aip01g02323 Pkinase 9e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02323 - - ahf:112697971 136.732