Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02305 ATGGCTGGTGGAAGGAGGAGGAAGCACCATTTCAGTAGAATCCATGCATTCACTTGTGGTAAAGCTTCAATGAAAGATGAACATTCTCTTATAGGTGGACCTGGTTTCTCAAGGAAAGTTTATTGCAATGATCCTGAACGTGTAGAAGCTAGTCTTCAAAATTATGGTGATAATTATGTTAGGACTACTAAGTATACATTAGCAACTTTTCTACCAAAATCATTGTTTGAGCAGTTTAGGAGAGTTGCAAATTTCTACTTCCTTGTGGTGGCAATTTTGTCCTTCTTTCCGGTTGCGCCATACTCGGCGATCAGCAATGTTGTTCCTTTATTGGTTGTGGTTGCTGCTACAATGGCCAAAGAGTTCATCGAAGATTATAGGCGAAAACAGCAGGATATTGAGATGAATAACAGAAAGGTTAAGGTACATCGCGGAAATGGTGTTTTTGAAATATCTAAATGGAGAAATTTAAGGGTTGGAGACATAGTGAAGGTGGAAAAGGATGAATTTTTCCCTGCTGATCTCATCTTACTTTCGTCGAGCTATGACGACGCGATTTGCTATGTTGAGACCATGAATCTTGATGGAGAAACAAATCTGAAGCTGAAACAAGCACTGGAAACAACTTCAAAGTTGCAGGAAGACTCAAACTACCAAAATTTCAAGGCTATTATCAAATGTGAAGATCCGAATGCGAATTTGTACACATTTGTAGGCAGCATGGAGTATGAGGATCAGCAGTATCCTCTTGCACCTCAGCAGATACTGCTTCGCGACTCGAAGCTGAGGAACACAGATTTTGTGTTTGGTGTGGTAATCTTCACTGGTCATGATACAAAGGTTATGCAGAATGCAACAGAACCACCATCAAAAAGAAGCAAAGTTGAGAGAAGAATGGATAAGATTATCTACTTCTTGTTCTTTGTTTTGATTTTGCTCTCTTTTATTGGGTCCATATTCTTTGGGATTTGGACAAACGAAGACATTGATGATGGAAGAATGAAGAGATGGTACCTTAGGCCTGATGATACCACAGTTTACTATGATCCCAATAAACCAGTCGAAGCTGCACTTCTTCATTTCTTGACAGCACTTATGTTGTATGGTTACTTGATTCCAATCTCCCTCTATGTATCCATCGAAATTGTGAAAGTTCTTCAGAGCATTTTCATCAACCAGGATGTGCACATGTACTACGCAGAAACTGATAGGCCGGCGCATGCTCGCACATCGAATTTGAATGAGGAACTTGGTCAAGTTGACACCATCCTTTCGGATAAAACAGGAACCTTGACTTGCAATTCTATGGAGTTCATCAAGTGTTCTATAGCCGGCGTTGCTTACGGACGAACAATTACAGAAGTTGAGAGAGCTCTATCTAAGAGAAAAGACTCACCATTTGGACAAAGGTCTAACAACAATGTTGCAAAGCCATCCATTAAAGGCTTTAACTTCACAGATGAAAGGATCATGAATGGAAATTGGGTCAAAGAGCCTCATGCCAATGTGATTCACAACTTCCTAACTTTGTTGGCTGTATGTCATACTGCAATACCTGAGGTTGATGAAGTAACTGGCAAGGTTTCATACGAAGCTGAATCGCCGGATGAGGCAGCTTTTGTGATTGCAGCCAGAGAACTTGGGTTTGAGTTCTATGAAAGGACACACACGGCTATTTCGCTGCACGAATTTGATCCCAGAACAGGCCAGAGAATTCAAAGGTCCTACAAACTTCTAAATGTATTAGAGTTTAGCAGCGCGAGGAAGCGAATGTCTGTAATTGTAAGAGATGAGGAAGGGAAACTACTACTACTTAGCAAAGGCGCCGACAGTGTCATGTTTGAAAGACTTGCAAGAAACGGAAGGGAGTATGAAGAGAAGACTAAGGAACACATCAGCATTTATGCTGATTCTGGTTTGAGGACCTTGATACTTGCATATCGCGAACTTAAAGAGGAAGAGTACAACCAATTCAATATAGAATTCACAGAGGCCAAGAACTTAGTGAGTGCAGATCAAGAGCAAATTGTAGAGGAAATAGTAAACAACATGGAGAAGGATTTGATTCTTCTTGGTGCTACTGCTGTTGAAGACAAACTTCAAGATGGGGTTCCCGAGTGCATTGACAAACTAGCACAGGCTGGGATTAAGCTATGGGTTCTGACTGGGGATAAAATGGAGACAGCAATCAATATTGGATTTGCTTGTAGTTTACTCAGACAAGGGATGACACAAATCATAATTAGCTCAGACACCCCAGAAACCAAATCACTGGAAAAAATGGAGGATAAGACTGCTTCTGACGCGGCCATGAAGGCGAGTGTTCTTCGTCAAATACAGGAGGGAAAGAAACTACTTTCTAGATCAGATGAAAACGCCGAGGCGCTGGCTCTGATTATTGATGGGAAGTCTCTTACTTATGCATTGGAGGATGATGTGAAGGACTTGTTTCTTGAACTTGCTGTTGGCTGCGCGTCTGTTATATGCTGTCGTTCGTCTCCCAAGCAGAAAGCACTTGTCACAAGGTTGGTTAAGAATAAAACAGGAAGTACAACTCTAGCAATTGGAGACGGCGCAAACGATGTTGGAATGCTTCAAGAAGCAGACATTGGAATTGGTATCAGTGGTGTTGAAGGAATGCAAGCTGTTATGTCGAGTGATATTGCAATTGCGCAATTTCGATTTTTGGAACGCTTACTTCTTGTGCACGGACACTGGTGTTATAGAAGGATCTCATCCATGATATGTTACTTCTTTTACAAGAATGTCGCCTTCGGCTTCACTCTGTTCTTCTTTGAGATGTATGCCTCATTCTCAGGACAAGCTGCATACAATGACTGGTTCATGTCACTCTATAATGTCTTCTTCACTTCGCTACCGGTGATTGCGTTGGGAGTGTTCGACCAAGATGTCTCTTCTAAAATATGCCTCAAGTTTCCACTACTATATCAAGAAGGTGTGCAAAACATCCTATTTAGCTGGAAGCGAATCGCCGGCTGGATGTTCAATGGTGTTGCTAGCTCTGCCATCATATTCTTCTTCTGCATTAACACATTGCAGCACCAAGCATTCAGAAAAGGCGGCCAAGTTGGCGAGATGGAAGTCCTCGGCGCCACCATGTACACTTGTGTAGTGTGGGTGGTGAATTGCCAAATGGCATTGTCCATTAGTTACTTCACTTATATTCAACATATTTTCATTTGGGGAAGCATTGCATTATGGTACATATTCCTTTTAGCCTATGGAGCCATTACTCCAACCATCTCAACCACTGCCTTTAAGGTCTTCGTCGAAGCTCTGGCCCCGGCTCCATCTTACTGGATCATCACTCTGCTAGTCCTTGTCGCCGCACTCCTTCCGTATTTCACCTACGCTTCCATCCAAATGCGATTCTTCCCCATGTTCCATCAAATGATACAATGGATAAGAAAAGATGGACAAACAAATGATCCAGAATACTGTAATGTGGTGAGGCAGAGATCAATAAGACACAACACGGTTGGATTCACGGCTCGTTTGGAAGCTTCCAAGCGATTCGAAGGGTCTAGACGCATGGAAGCATCCTTCCATATAGAAGGGAGAGCTATGTACCAATGA 3597 0.422 MAGGRRRKHHFSRIHAFTCGKASMKDEHSLIGGPGFSRKVYCNDPERVEASLQNYGDNYVRTTKYTLATFLPKSLFEQFRRVANFYFLVVAILSFFPVAPYSAISNVVPLLVVVAATMAKEFIEDYRRKQQDIEMNNRKVKVHRGNGVFEISKWRNLRVGDIVKVEKDEFFPADLILLSSSYDDAICYVETMNLDGETNLKLKQALETTSKLQEDSNYQNFKAIIKCEDPNANLYTFVGSMEYEDQQYPLAPQQILLRDSKLRNTDFVFGVVIFTGHDTKVMQNATEPPSKRSKVERRMDKIIYFLFFVLILLSFIGSIFFGIWTNEDIDDGRMKRWYLRPDDTTVYYDPNKPVEAALLHFLTALMLYGYLIPISLYVSIEIVKVLQSIFINQDVHMYYAETDRPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRTITEVERALSKRKDSPFGQRSNNNVAKPSIKGFNFTDERIMNGNWVKEPHANVIHNFLTLLAVCHTAIPEVDEVTGKVSYEAESPDEAAFVIAARELGFEFYERTHTAISLHEFDPRTGQRIQRSYKLLNVLEFSSARKRMSVIVRDEEGKLLLLSKGADSVMFERLARNGREYEEKTKEHISIYADSGLRTLILAYRELKEEEYNQFNIEFTEAKNLVSADQEQIVEEIVNNMEKDLILLGATAVEDKLQDGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMTQIIISSDTPETKSLEKMEDKTASDAAMKASVLRQIQEGKKLLSRSDENAEALALIIDGKSLTYALEDDVKDLFLELAVGCASVICCRSSPKQKALVTRLVKNKTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNVAFGFTLFFFEMYASFSGQAAYNDWFMSLYNVFFTSLPVIALGVFDQDVSSKICLKFPLLYQEGVQNILFSWKRIAGWMFNGVASSAIIFFFCINTLQHQAFRKGGQVGEMEVLGATMYTCVVWVVNCQMALSISYFTYIQHIFIWGSIALWYIFLLAYGAITPTISTTAFKVFVEALAPAPSYWIITLLVLVAALLPYFTYASIQMRFFPMFHQMIQWIRKDGQTNDPEYCNVVRQRSIRHNTVGFTARLEASKRFEGSRRMEASFHIEGRAMYQ 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02305 1198 SFLD p-type atpase 406 906 IPR044492 -
Aip01g02305 1198 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1178 - -
Aip01g02305 1198 SUPERFAMILY Calcium ATPase, transmembrane domain M 45 1133 IPR023298 -
Aip01g02305 1198 Pfam E1-E2 ATPase 135 336 - -
Aip01g02305 1198 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 107 210 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip01g02305 1198 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 822 938 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip01g02305 1198 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Aip01g02305 1198 SUPERFAMILY Calcium ATPase, transduction domain A 137 285 IPR008250 -
Aip01g02305 1198 Gene3D - 106 287 - -
Aip01g02305 1198 SFLD C1.7: P-type atpase like 406 906 - -
Aip01g02305 1198 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 431 693 IPR023299 GO:0000166
Aip01g02305 1198 CDD P-type_ATPase_APLT_Dnf-like 57 1015 - -
Aip01g02305 1198 Gene3D - 530 667 IPR023299 GO:0000166
Aip01g02305 1198 Pfam Cation transport ATPase (P-type) 525 616 - -
Aip01g02305 1198 SUPERFAMILY HAD-like 419 910 IPR036412 -
Aip01g02305 1198 Gene3D - 687 895 IPR023214 -
Aip01g02305 1198 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Aip01g02305 1198 PRINTS P-type cation-transporting ATPase superfamily signature 855 874 - -
Aip01g02305 1198 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Aip01g02305 1198 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 1140 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Aip01g02305 1198 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1178 - -
Aip01g02305 1198 Pfam Phospholipid-translocating P-type ATPase C-terminal 883 1133 IPR032630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02305 Aip-Chr1 121132199 121137534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02305 1 1178 Primary Pumps ATPases AT1G68710 68.581 0.0 1776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02305 K01530 K14802 gmx:100796405 2072.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02305 01 121132199 121137534 Aip10g02786 10 119877641 119884816 ECH
Aip01g02305 01 121132199 121137534 Aip01g02305 01 121132199 121137534 ECH