Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02297 ATGGAGATTAGTGCCATCATGGCTTCAGCAACTCCAAGACCTTCTCTTCCAATTCCAACTCCATCTTCTTCTTCTTCTTCTTCTTCTTCAACATTAGTCTCAAACTCCAAGTTGCCATTGTTGAAGCGTTCATCACACATAACACTTCCAACCTCAACTACCATTTCACTTCTCGCACTCTTTTCACCACCCCATGAAGCCAAAGCAGCTCTCACCATCCCCAAGGACCAGATTGTCTCTTCTCTCAACGATGTGGAGAAGACGATTGATCAGGTTCAGGTGGTGGGTTCGAGTTTCCTTGATGCGGCACAGCGTGTTTTGGAGATTGTGGGGAATGCTTTGAAGCCTGGAATCGATGCGGCGATGCCGATTGTGCAGCAGGCTGGGGAGGAGGCCTTGAAGATAGCTTCCCCTGCCATCTCTGAAGCTTCCAAGAAGGCACAAGAAGCACTCCAAAGCACTGGTGTTGATCCCCAACCTGTCATCACTGCTGCCAAGACAGTCGTGGACACTGCACAACAAACAACCAAGGTGATTGAAGGTGCGAAGCCAATAGCTTCGGCGACAGTTGAAACAATATCTTCTTCAGATCCTACTGTGATTGCTGGAACAGCTGGAGCACTCTTTATTGCGTACCTCTTACTTCCTCCAATTTGGTCTGCCATCACCTTCAACTTCCGTGGTTACAAAGGTGAGCTTACGCCTGCTCAAACCCTCGATCTGATATCAACACAAAACTACTTCATGATTGATATTAGGTCAGAGAAAGATAAGGACAAGGCCGGTGTTCCCCGCCTTCCGTCTAGTGCGAAAAACAGAATGATTGCCATTCCATTGGAAGAACTACCAAGCAAGCTCAGAGGACTTGTTAGGAATGTGAAGAAAGTGGAAGCTGAACTAGCAGCTTTGAAGATTTCTTACTTGAAGAAAATCAACAAAGGCTCCAACATTGTGATCATGGACTCGTACTCGGACTCGGCGAAAATAGTAGCAAGAACATTAACGAGCCTCGGTTTCAAGAACACGTGGATTGTGGCAGACGGGTTCTCGGGGAACAAAGGGTGGTTACAGAGTAGACTTGGAACAGATTCTTATTTCTCTTCGTTTGCAGAGGTGTTGTCTCCATCAAGAGTCATCCCTGCAGCTGTTAGAGGTTTTGGAACAACCTCCCAATCAAGTGCCAAGCTTCTTCCTGGAGCTGATTGA 1206 0.4701 MEISAIMASATPRPSLPIPTPSSSSSSSSSTLVSNSKLPLLKRSSHITLPTSTTISLLALFSPPHEAKAALTIPKDQIVSSLNDVEKTIDQVQVVGSSFLDAAQRVLEIVGNALKPGIDAAMPIVQQAGEEALKIASPAISEASKKAQEALQSTGVDPQPVITAAKTVVDTAQQTTKVIEGAKPIASATVETISSSDPTVIAGTAGALFIAYLLLPPIWSAITFNFRGYKGELTPAQTLDLISTQNYFMIDIRSEKDKDKAGVPRLPSSAKNRMIAIPLEELPSKLRGLVRNVKKVEAELAALKISYLKKINKGSNIVIMDSYSDSAKIVARTLTSLGFKNTWIVADGFSGNKGWLQSRLGTDSYFSSFAEVLSPSRVIPAAVRGFGTTSQSSAKLLPGAD 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02297 401 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 209 351 IPR036873 -
Aip01g02297 401 MobiDBLite consensus disorder prediction 1 32 - -
Aip01g02297 401 CDD RHOD 237 351 - -
Aip01g02297 401 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 7 399 IPR044690 GO:0009704|GO:0071277|GO:0090333
Aip01g02297 401 PANTHER CALCIUM SENSING RECEPTOR, CHLOROPLASTIC 7 399 - -
Aip01g02297 401 ProSiteProfiles Rhodanese domain profile. 243 364 IPR001763 -
Aip01g02297 401 Coils Coil 286 306 - -
Aip01g02297 401 Gene3D - 231 368 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02297 Aip-Chr1 120853597 120856070 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02297 34 322 Sulfurtransferasese or Rhodanese AT5G23060 71.724 8.50e-154 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02297 - - adu:107469155 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02297 01 120853597 120856070 Aip01g02297 01 120853597 120856070 ECH