Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02284 ATGGATATGCATAAGAGAAGGAAGAACTTCATGGAAACCAACATTAAAAAATCCAAGGAGCTTTTGAAAAGCATGGACCATGGCCATGTTTCAGATATCAGTATGAAAGAAGTTAACAAAGATCTTGTGACATCATTTAAGGAAAAACTCGAAGCGATTTCATCTTTGAAATCTATCTTCAAGGTCCCTGTGAAGCTTCTACAAACAAACCAGAAGGTGTACATCCCTACTAAAGTGTTAGAAGGTAAAGATTTTCCCTCAACTGCATATTGTTACTTTGTTACTGAATTGAATATCAGATTGGTAGGTCAGCTTCACCGGTTCGATGGAGATAAAGCTGCTAGCCTTGCTCTCTTGGGCATAGTATATAACAAGGGTGAGATATGTGTTGCAAGTTCACGTGTGTTTGTTCAGGAAGGGAATGGTGTAGACATGTTTGGAAAGCGCATTGGGTTTCTCAAATTTAAAGTTGACATTTATGACAAACAAACGAGGAAGAAGGTTCCAGGTATTGTATTTGCAAGAGGACCTGTTGTGACTGTGTTGATACTTCTGGAATCAGATGGTGAAACTTATGCTGTCCTTACTGAACAGGCAAGGGTTCCTACTGGAAGAATTATTTTGGAATTGCCTGCTGGAATGTTGGATGATGACAAGGGTGATTTTGTTGGCAGTTGGCATCGTGAGGTTGAAGGGGAGACTGGCATAAAGTTCCAACTTGAAGACATGGTTGATCTCACTGCTTTCTTGGATTCTTCAACAGGATGCAGATTTTTTCCCTCACCGATAGTAGACTATAAGAGACCAACCTATGAAGAAGTTATGAGAACCTCCAAGCCTTACTTCCAAGGGAGTGCAATATCTGCCAAGTGCAAATTGGCAAAATGGTGA 891 0.4029 MDMHKRRKNFMETNIKKSKELLKSMDHGHVSDISMKEVNKDLVTSFKEKLEAISSLKSIFKVPVKLLQTNQKVYIPTKVLEGKDFPSTAYCYFVTELNIRLVGQLHRFDGDKAASLALLGIVYNKGEICVASSRVFVQEGNGVDMFGKRIGFLKFKVDIYDKQTRKKVPGIVFARGPVVTVLILLESDGETYAVLTEQARVPTGRIILELPAGMLDDDKGDFVGSWHREVEGETGIKFQLEDMVDLTAFLDSSTGCRFFPSPIVDYKRPTYEEVMRTSKPYFQGSAISAKCKLAKW 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02284 296 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 122 133 IPR016160 GO:0016491
Aip01g02284 296 SUPERFAMILY Nudix 153 250 IPR015797 -
Aip01g02284 296 PANTHER NUDIX HYDROLASE 14, CHLOROPLASTIC 141 262 - -
Aip01g02284 296 PANTHER UDP/ADP-SUGAR PYROPHOSPHATASE 141 262 - -
Aip01g02284 296 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 146 262 - -
Aip01g02284 296 Pfam NUDIX domain 176 258 IPR000086 -
Aip01g02284 296 SUPERFAMILY ALDH-like 108 151 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02284 Aip-Chr1 120335798 120338949 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02284 109 140 Aldehyde Dehydrogenase Gene Family AT3G24503 87.500 6.91e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02284 K18447 - rcu:8272470 201.06