Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02282 ATGGTTATTGAAAATGAGATAGAAGAATATGTGTTGTTGTTAATGGTGGAAGTTTTTTTATTTAAAATAACTGACATATGGGGAGAGATAGAGTGGTGTTATAATAATAAGAAGAAGAATGGGGTGTTCATTTTCTGGTTTGACGCACTTTACGATTCCGTTAACGGAGGCGGAGATGTTTGGATCAACGAGAACCGGTTCCGTATCGTCAGGCAGCTCGGTGAAGGTGGCAACGCCTATGTCTTCCTCGTCAAGGACGTTCCCGCCGACAACATCTCCGGCGGTTTCTCCTCCAAGCTCAAACAGTCCTCTCACATTTCCGAGGACGGAACATATGCTATGAAAAAGGTCCTCATCAAGAGCAATGAGCAGCTGGAGTTGGTCAGGGAGGAGATCCGTGTTGCATCACTGTTCAACCACCCAAATCTGCACCCGCTTCTCGATCATGCAATCATTTCTGTCAAGCCTACTCCACAAAAATCTTGGAACCACGAGGCATACTTGTTATTTCCACTTCGTTTGGATGGAACACTGCTAGATAATACCAAGACAATGCAAGCCAGGAAGGAATCCTTTCCTACCTCTGATGTTCTTCAAATCTTTCAACAGatattccaaacgatcgcacggaagcatcttaGACTCGAGCATATGCATGGTTTAGATACTCCATATGCTCATAATGATGTCAAACCTGGTAATGTTCTCATAACACATAGAAAAGGACAACCGCCTCTTGCCATACTCATGGATTTTGGCAGTGCTCGTCCTGCCAGGAAGCACATTGGTTCCAGATCAGAGGCACTCCAGTTGCAGGAATGGGCAGCTGAACACTCTTCTGCCCCTTTCCGAGCTCCGGAGCTGTGGGAATGCCCAAGCCAAGGTGATATAGACGAGAGGACTGACGGATTGCTGTGCGGCCCCGGATAG 930 0.4505 MVIENEIEEYVLLLMVEVFLFKITDIWGEIEWCYNNKKKNGVFIFWFDALYDSVNGGGDVWINENRFRIVRQLGEGGNAYVFLVKDVPADNISGGFSSKLKQSSHISEDGTYAMKKVLIKSNEQLELVREEIRVASLFNHPNLHPLLDHAIISVKPTPQKSWNHEAYLLFPLRLDGTLLDNTKTMQARKESFPTSDVLQIFQQIFQTIARKHLRLEHMHGLDTPYAHNDVKPGNVLITHRKGQPPLAILMDFGSARPARKHIGSRSEALQLQEWAAEHSSAPFRAPELWECPSQGDIDERTDGLLCGPG 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02282 309 Gene3D Transferase(Phosphotransferase) domain 1 174 303 - -
Aip01g02282 309 PANTHER PHOSPHORYLASE KINASE, GAMMA CATALYTIC SUBUNIT-RELATED 47 302 - -
Aip01g02282 309 Pfam Protein kinase domain 95 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02282 309 SUPERFAMILY Protein kinase-like (PK-like) 60 290 IPR011009 -
Aip01g02282 309 SMART serkin_6 67 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02282 309 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Aip01g02282 309 ProSiteProfiles Protein kinase domain profile. 67 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02282 309 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 47 302 - -
Aip01g02282 309 Gene3D Phosphorylase Kinase; domain 1 52 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02282 Aip-Chr1 120181657 120185577 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02282 66 237 Miscellaneous Gene Families AT3G23000 26.163 9.84e-06 45.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Aip01g02282 Pkinase 2.1e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02282 K08856 - gmx:100803659 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02282 01 120181657 120185577 Aip01g02282 01 120181657 120185577 ECH