Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02280 ATGGGGTGTTCATTTTCTGGTTTGAACGCACTTTACGATTCCGTTAACGGAGGCGGAGATGTTTGGATCAACGAGAACCGGTTCCGTATCGTCAGGCAGCTCGGTGAAGGTGGCAACGCCTATGTCTTCCTCGTCAAGGACGTTCCCGCCGACAACGTCTCCGGCGGTTTCTCCTCCAAGCTCAAACAGTCCTCTCACATTTCCGAGGACGGAACATATGCTATGAAAAAGGTCCTCATCAAGAGCAATGAGCAGCTGGAGTTGGTCAGGGAGGAGATCCATGTTTCATCACTGTTCAACCACCCAAATCTGCTCCCGCTTCTCGATCATGCAATCATTTCTGTCAAGCCTACTCCACAAAAATCTTGGAACCACGAGGCATACTTGTTATTTCCACTTCATTTGGATGGAACACTGCTAGATAATACCAAGACAATGCAAGCCAGGAAGGAATCCTTTCCTACCTCGGATGTTCTTCAAATCTTTCGACAGCTTTGTGCAGGACTCAAGCATATGCATGGTTTAGATACTCCATATGCTCATAATGATGTCAAACCTGGTAATGTTCTCATAACACATAGAAAAGGACAACCGCCTCTTGCCATACTCATGGATTTTGGCAGTGCTCGTCCTGCCAGGAAGCACATTGGTTCCAGATCAGAGGCACTCCAGTTGCAG 678 0.4764 MGCSFSGLNALYDSVNGGGDVWINENRFRIVRQLGEGGNAYVFLVKDVPADNVSGGFSSKLKQSSHISEDGTYAMKKVLIKSNEQLELVREEIHVSSLFNHPNLLPLLDHAIISVKPTPQKSWNHEAYLLFPLHLDGTLLDNTKTMQARKESFPTSDVLQIFRQLCAGLKHMHGLDTPYAHNDVKPGNVLITHRKGQPPLAILMDFGSARPARKHIGSRSEALQLQ 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02280 226 ProSiteProfiles Protein kinase domain profile. 28 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02280 226 PANTHER PHOSPHORYLASE KINASE, GAMMA CATALYTIC SUBUNIT-RELATED 1 226 - -
Aip01g02280 226 Gene3D Transferase(Phosphotransferase) domain 1 16 225 - -
Aip01g02280 226 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 1 226 - -
Aip01g02280 226 SMART serkin_6 28 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02280 226 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Aip01g02280 226 Pfam Protein kinase domain 56 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02280 226 SUPERFAMILY Protein kinase-like (PK-like) 21 215 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02280 Aip-Chr1 120039491 120042090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02280 24 210 Receptor kinase-like Gene Family AT2G31880 27.660 6.99e-07 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Aip01g02280 Pkinase 2.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02280 K08856 - gmx:100803659 393.66