Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02277 ATGGGAGTTTTCACTTTCATGCTACACAAGTCTAGCGGAGAATGGACAACGAAGCAGCATAACAGCGACATCGAGGAGTCGTCTTCTGACACCTTCGAAATCCAATGGAAGCTTGTTAAGGCTGTCTGCGTAGTCGAATCATCCGACGCCGTTCAATCCTCTTTCTCCATAGTTACCCCTTCCTCCGCCATTTTTCAGATACTCTTTCTCGATCTCGTTTAG 222 0.4685 MGVFTFMLHKSSGEWTTKQHNSDIEESSSDTFEIQWKLVKAVCVVESSDAVQSSFSIVTPSSAIFQILFLDLV 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02277 73 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 67 IPR044252 GO:0003735|GO:0005840
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02277 Aip-Chr1 119884294 119884515 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02277 1 68 Cytoplasmic Ribosomal Protein Gene Family AT4G25890 50.000 6.09e-21 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02277 K02942 - gmx:100804776 85.1149