Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02240 ATGTCATCATCACAACTATGCTCTATGCTTCTCCCACCTTCACTTTGTTTTGCATCACTCAACTTTCATGTCTTCCTTACTCTCCTTCTATTGCTTCTTGTTTTCAACTATTGGTTGGTCCCTGGTGGTCTTGCTTGGGCTCTCTCCAAGTTCCGTTTAGAATCACCACGTGCCCATAATACTAATAACAACAACAAAAGGTCGATTCCTGGGCCTTCAGGTCTTCCAGTTCTTGGCCTTGTTTCAGCCTTCACTGGAACCCTAACTCACAGGGTTCTGGCGAACTTGGCTGAAACATTTAAGGCCAAGAACTTGATGGCATTTTCCATTGGGGTGACCCGGTTTGTTATCTCCACAAACCCTAACACGGCCAAAGAGATTCTTAACAGTTCAGCTTTCGCTGATCGACCTATCAAAGAATCAGCTTACGAGCTTCTCTTCCACCGTGCAATGGGGTTCGCTCCTTATGGCGAATACTGGAGGAACCTTAGAAGAATCGCCACCGTTCATTTGTTCTCTCCACGGAGGATCGCTGCTAGCGGTGAGTTCAGAGCTAGAGTTGGTGAGCACATGGTGAAAGAAATGGTTGGTTTGATGGAGAAGAAGAGTGAGGTTAAGGTTAGAGAGGTGTTGCATTTAGGATCGTTAAACAATGTGATGATGAGTGTGTTCGGGAAAAGCTATGAGTTTGGTGAAGGTGGTAATGGGTGTGAGCTTGAAGAGTTGGTGAAAGAAGGGTATGATCTGCTTGGTGTTTTCAATTGGAGTGACCACTTCCCTTTCTTGGGTTGGTTGGATTTGCAAGGTGTCAGAAAGAGGTGTAGGAATCTAGTAGCGAAAGTGGATGATTTTGTTGGAAATATCATATTGGAACATAGAATGAAAAGGGTTGCCAAGGATGAAGCCTTTGATGACTTTGTTGACGTGTTACTAGATTTGGAAAAACAGAGCAAGCTTCAGCACTCCGATATGGTTGCTATTCTTTGGGAAATGATATTTAGAGGGACTGATACAGTAGCAATTCTTTTGGAATGGATTCTAGCACGGATGGTATTGCACCCTGAAATCCAAGCAAAAGCTCAATCTGAAATTGACTCTGTAGTTGGATATGATCGTACAATCAATGATTTAGATCTTCAAAATCTACCATACCTACGTGCCATAGTGAAAGAAACCCTAAGAATGCACCCACCAGGCCCACTGCTATCATGGGCGAGGCTTGCAATCCACGACACACAAGTGGGCCCCCACATGATTCCAGCTGGCACAACGGCAATGGTTAACATGTGGGGCATCACGCATGACAAAGAAGTTTGGTGTGAGCCGGAAGAGTTCAAGCCAGAGAGGTTCATAGAAGAAGAGGTTCAAATAATGGGGTCTGATCTTAGGGTTGCACCATTTGGTTCTGGAAGAAGGGTGTGTCCTGGCAAGGCTATGGGCTTGGCCACTGTGGAGCTTTGGCTTGCTATCTTGCTTCAAACCTTCAAATGGATTCCTACAAATCATCTTGACTTATCTGAGTGCTTGAAACTCTCTCTTGAGATGAAGTCACCTCTTCTTGCTAAGCTTATTCCAAGATTTGGTTAA 1587 0.4455 MSSSQLCSMLLPPSLCFASLNFHVFLTLLLLLLVFNYWLVPGGLAWALSKFRLESPRAHNTNNNNKRSIPGPSGLPVLGLVSAFTGTLTHRVLANLAETFKAKNLMAFSIGVTRFVISTNPNTAKEILNSSAFADRPIKESAYELLFHRAMGFAPYGEYWRNLRRIATVHLFSPRRIAASGEFRARVGEHMVKEMVGLMEKKSEVKVREVLHLGSLNNVMMSVFGKSYEFGEGGNGCELEELVKEGYDLLGVFNWSDHFPFLGWLDLQGVRKRCRNLVAKVDDFVGNIILEHRMKRVAKDEAFDDFVDVLLDLEKQSKLQHSDMVAILWEMIFRGTDTVAILLEWILARMVLHPEIQAKAQSEIDSVVGYDRTINDLDLQNLPYLRAIVKETLRMHPPGPLLSWARLAIHDTQVGPHMIPAGTTAMVNMWGITHDKEVWCEPEEFKPERFIEEEVQIMGSDLRVAPFGSGRRVCPGKAMGLATVELWLAILLQTFKWIPTNHLDLSECLKLSLEMKSPLLAKLIPRFG 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02240 528 PANTHER CYTOCHROME P450 78A7-RELATED 23 526 - -
Aip01g02240 528 PRINTS E-class P450 group I signature 214 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g02240 528 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g02240 528 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g02240 528 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g02240 528 PRINTS E-class P450 group I signature 428 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g02240 528 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g02240 528 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g02240 528 PANTHER CYTOCHROME P450 FAMILY PROTEIN 23 526 - -
Aip01g02240 528 Pfam Cytochrome P450 70 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g02240 528 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g02240 528 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g02240 528 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g02240 528 PRINTS P450 superfamily signature 474 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g02240 528 Gene3D Cytochrome P450 55 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g02240 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Aip01g02240 528 SUPERFAMILY Cytochrome P450 69 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02240 Aip-Chr1 118767256 118769121 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02240 26 526 Cytochrome P450 AT1G74110 64.535 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02240 K20619 - gmx:100811042 741.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02240 01 118767256 118769121 Aip01g02240 01 118767256 118769121 ECH