Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02235 ATGGCTGCAAAGTTGCTGCATTCTTTAGCAGATGAAAACCCAGATTTGCAGAAGCAAATTGGATGCATGACTGGGATTTTCCAACTGTTTGATCGTCACCAGATAGTTACCCCTCGCCGCATTAGCCACAAGAGGCTTCCTCCTGGTAATTCCCACTCCAATTATGAGAGCTTGAGAAGAGATTCTAATAGCATACACCAACGGCAAACAGCTGCTGATATGAACTTAAACAAGGGTGTAAGTGAAAAACAAAGAATTTCAACAGAATCATCAAGGGCCTCATTCTCTTCATCATGTTCATCGTCAATATCCTCTATGGACTGTAAAGCTCAAGCAGATGCTTCCTTCGACCGAATTACTTTTCCTGAAACTCCTAGAAGGGACCAAGTTATGAACCAAACAAGTACCTCTACAAATTTGGGTCACCAGTCCCTTGACCTGAGGGATGTGGTAAAAGACTCTATGTACAGAGAGGCCAGAGGACTATCAGTGAAGACTACAATCAAAGAAGAAGTTTCCATTCGTGCATCGAAGCAGAAAGATTCACCGAGACCTCTTCATCTGTCCATTTCTGATTATGAATATGATAGAGTTGGAATTGATGGAAAACAAAGTGTGCCTATTGATCTAAAGGAGTCTATCCGAGTCCTTTCTAAGCTTACAGAAGCCCCTTGGCACTATGATGAAGGTAGAGAGCTTCGGAGGTTGCCTTATGAAGTAAAAGATGGACAATGGCATTCGATCTCAAAGGATGCTCGTCGGTTTTCTTATGATGCAAGGGAAGTACATCGATACTCTTCTGAATCACAAGATACCATCAAATCCACACCAAGACTAAAAGAGCTTCCTAGACTTTCCCTTGACAGCAGGGAAGTTTCTTGGCGTACTTATACCTCTGATTCAAAATCCAATCATCTCTTAAGAAATTTCAGTAGTGGTACTTCCGACTCAGATGACAAAGTCTCAAGTCTGCAACAACGGCCTTCAGCAGCATCACAGAGCAGGCCACCGAGTGTTGTAGCAAAATTAATGGGGTTGGAAGCATTGCCAGCGTCCAATTTAGCCAGTGAGACTCACTCAATTTTGAGTGAAACTGACCCAACTCAAGGTGATGATCAGTTTTCAAGATCATCAAAAAATGGACTCATTAGGCCATTCAAAGTTTCTAATTCTTCGAAAAGCTCAATGAAAGACCCGAGTTCCCCAAGCAGGAAGAACCCGGATTTGGTTGTGAAACCTATCTCAAGTTCAAGGCATCCCATTGAACCTGCACCATGGAAGCGGCGAGATAGAAATCAAAGTTCACCAAGACCAAGTTCCGGGGCCATGAAGGCTACAAGTATAACAGATTCATTCCCTTCAGTTTACAGTGAAGTTGAGAAGAGATTGAAGAATCTTGAATTTGATCAGTCTGGAAGGGATCTTAGAGCGCTCAAACAGATACTAGAAGCAATGCAAGCAAAGGGGCTGCTAGAGACAAGACAAGAAGAACAAGCTTCAAATCTTGTAGGAAATCAAAGAGACCATGAACCAAAACCTGCGAGTCTAACTCAGAATTCTAGGACAGCAAGGAAACAAAGTCCTCACAGAAACAACATTGCATCTTCAACTTTCGGTGGATCTGACTCAGCAAGGAGCTTTGAATCTCCAATTGTAATAATGAAACCGGCAAAGCACATTGAGAAAAATGGAATTTCATCATCTTCAGTTATTCCACTTGTTGAGCTTTCTGATTCACATAAACTCCAGAGTGTGAGGATGAAGGTACGTACAGGTAATGGAAAGGGTACAGGTTCTGGTCGAATAACAAAAGATCAGTCTCCTAGAAACAATCACAGGGAAGCTTCTACTAGCTTCAGTGAAAAGAAAGCTAGTAGCAAGACTATAAGATCAACACAATCACAACCAAGATCTCAGCAGTTTACAAAAGAAAATAGCCCAAGCTCTGTAAAGAACTCAGGATCTGTTAGCCCAAGATTGCAACAAAAGAAGTTAGAACTTGAGAAGTGTTCTCGCCCACCAACACCTCCATCAGAGTCAAGTAAACCAAGACGACAATCTGGTAAGCAGACCACAGAATCAGGTTCTCCGGGTAGAAAACCGAGGCATAAAGTCCCTATTTCACAACAAAGTGATGACCAACTTAGTGAAATAAGCAATGAATCAAGAAGTTTGAGTTTCCAAGGGGATGAGACATCACTACAATCAGGAAGTACCATAATTGAGTCAAAGATGGATGTGGAATTAGCCAGCAATTTACAATCTGCTGAAACTGTCGGAAGCCAAGGCCCATCTCTTAAGGCTATTGAGCAGGTGGTTTCAGGAACAATACAGAAGAAATCAACTCTGATGTTGGATGAGAATGAGCCTATTTCAGAACTTGCAATGGATGCTCCAGATCATCCGAGCCCTGTATCGGTTCTGGACGGCTCAGTATACAGAGAGGATGTGCTATCCCCAGTCAAGCTTATATCCAATGCTCCGAAAGGTGATGTTCAATCTAAAGAATACGATTATGAATATCAGTGGAACACTGCAGATGATAGCCTTTCAGTTAACAGCGAGATCAACCGCAAGAAATTGCAAAGCATAGATCACCTGGTTCAGAAGCTTAGACGGCTAAACTCGAGTCACGACGAGGCTAGAATCGATTACATTGGTTCCCTTTGCGAAAACTCGAACCCAGACCACAGATACATATCAGAAATACTATTGGCTTCAGGTCTCCTGCTCAGAGATCTGAGTTCAGAATTGCTGACATTTCAACGCCACTCGTCGGGTCATCCCATTAACCCCGAGTTGTTCCTTGTATTGGAGCAGACCAAGACAAGTAGCTTTCTTGCTAAAGAAGAAATCGGCATTGAAAAAGTTGATTACAAGAAGACAAACACAGACAAGTCTCACAGGAGATTCATCTTTGATGCTGTGAATGAGATTCTTGGCATGAAACTAGCTTCTTCTCCTGAACCATGGTTGAAGCCTAATGGACTCGCAAAGAAGAACCTCAGTGCACAGAAACTTCTAAAAGAACTGTGCTTTGAGATAGAAAAAATTCAAGTGAAGAAGCCCGAATGCACAGAAGATGAAGGTGATGGTATAAAAAGTATACTATGTGAAAATGTTATGAATGGAACAGAAAGTTGGACAATTTTCCATGGTGAAACATCTGGGGTTGTGTTGGATGTTGAGAGACTGATATTTAAGGACTTAATTGATGAGATTGTGATTGGTGAAGCAACGGGCTTGAGAATCAAGCCAGGTAGACGCAGGAAGCTATTTGGAAAGTAA 3288 0.4209 MAAKLLHSLADENPDLQKQIGCMTGIFQLFDRHQIVTPRRISHKRLPPGNSHSNYESLRRDSNSIHQRQTAADMNLNKGVSEKQRISTESSRASFSSSCSSSISSMDCKAQADASFDRITFPETPRRDQVMNQTSTSTNLGHQSLDLRDVVKDSMYREARGLSVKTTIKEEVSIRASKQKDSPRPLHLSISDYEYDRVGIDGKQSVPIDLKESIRVLSKLTEAPWHYDEGRELRRLPYEVKDGQWHSISKDARRFSYDAREVHRYSSESQDTIKSTPRLKELPRLSLDSREVSWRTYTSDSKSNHLLRNFSSGTSDSDDKVSSLQQRPSAASQSRPPSVVAKLMGLEALPASNLASETHSILSETDPTQGDDQFSRSSKNGLIRPFKVSNSSKSSMKDPSSPSRKNPDLVVKPISSSRHPIEPAPWKRRDRNQSSPRPSSGAMKATSITDSFPSVYSEVEKRLKNLEFDQSGRDLRALKQILEAMQAKGLLETRQEEQASNLVGNQRDHEPKPASLTQNSRTARKQSPHRNNIASSTFGGSDSARSFESPIVIMKPAKHIEKNGISSSSVIPLVELSDSHKLQSVRMKVRTGNGKGTGSGRITKDQSPRNNHREASTSFSEKKASSKTIRSTQSQPRSQQFTKENSPSSVKNSGSVSPRLQQKKLELEKCSRPPTPPSESSKPRRQSGKQTTESGSPGRKPRHKVPISQQSDDQLSEISNESRSLSFQGDETSLQSGSTIIESKMDVELASNLQSAETVGSQGPSLKAIEQVVSGTIQKKSTLMLDENEPISELAMDAPDHPSPVSVLDGSVYREDVLSPVKLISNAPKGDVQSKEYDYEYQWNTADDSLSVNSEINRKKLQSIDHLVQKLRRLNSSHDEARIDYIGSLCENSNPDHRYISEILLASGLLLRDLSSELLTFQRHSSGHPINPELFLVLEQTKTSSFLAKEEIGIEKVDYKKTNTDKSHRRFIFDAVNEILGMKLASSPEPWLKPNGLAKKNLSAQKLLKELCFEIEKIQVKKPECTEDEGDGIKSILCENVMNGTESWTIFHGETSGVVLDVERLIFKDLIDEIVIGEATGLRIKPGRRRKLFGK 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02235 1095 MobiDBLite consensus disorder prediction 305 336 - -
Aip01g02235 1095 Pfam DUF761-associated sequence motif 332 353 IPR032795 -
Aip01g02235 1095 MobiDBLite consensus disorder prediction 498 544 - -
Aip01g02235 1095 MobiDBLite consensus disorder prediction 681 695 - -
Aip01g02235 1095 MobiDBLite consensus disorder prediction 621 660 - -
Aip01g02235 1095 MobiDBLite consensus disorder prediction 357 402 - -
Aip01g02235 1095 MobiDBLite consensus disorder prediction 584 735 - -
Aip01g02235 1095 Pfam Domain of unknown function (DUF4378) 896 1073 IPR025486 -
Aip01g02235 1095 MobiDBLite consensus disorder prediction 357 448 - -
Aip01g02235 1095 PANTHER LONGIFOLIA PROTEIN 1 1093 - -
Aip01g02235 1095 MobiDBLite consensus disorder prediction 40 94 - -
Aip01g02235 1095 MobiDBLite consensus disorder prediction 305 337 - -
Aip01g02235 1095 MobiDBLite consensus disorder prediction 606 620 - -
Aip01g02235 1095 MobiDBLite consensus disorder prediction 708 735 - -
Aip01g02235 1095 MobiDBLite consensus disorder prediction 47 94 - -
Aip01g02235 1095 PANTHER LONGIFOLIA PROTEIN 1 1093 IPR033334 GO:0051513
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02235 Aip-Chr1 118521451 118526667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02235 140 1094 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 46.748 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02235 - - gmx:100787391 1332.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02235 01 118521451 118526667 Aip01g02235 01 118521451 118526667 ECH