Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02234 ATGAGTTCAAGCAAAAGCAGCTATGAAGCGAAGCAAGAAGACGAGGGCGGTGGAGGCACTAGCTCTTCAAGACAGTGGACAGCGTTCAGGAATCCAAGAATCGTTCGAGTTTCGCGGTCTTTGGGAGGGAAAGACAGGCACAGCAAGGTTTGCACCATTAGAGGTCTAAGGGACCGGAGAATTCGGCTCTCCGTTCCCACCGCCATTCAGTTGTATGATCTCCAAGACCGACTCGGCCTGGGTCAACCCAGCAAGGTCATTGATTGGTTGCTTCAAGCCACCAAACTCGACATTGATAAGCTACCGCCCCTTCAAATCCCTCCCGGTTTTGCTCAATTTCACCATCACCAAACCCTAATTCCCCTTTCTCATCATCATCAATTCTCCCTTGGCGGCTTCTATGATGCCAATTCCACAAGGTTTTGGGATCTGGATTCTTCTTCAATTAGCCTAAAAGGTAAAGAATCTGATACTATTACTCATCCAGCTGGTGTGATATCTGAGAAAGGAAAATGGATCAAAACAAATCAACATGTTGATGAAAATCAAGACGGATTGTTGTTGCTTAACAATGCTATGGGATATAATTCTCCTTCAGGATTAACTTTATCATCATCCTCCTCATCTTCACAATTTGGAAGCCATGCATTATTGTTTCCTTCACAACAGTTATTGGATCCCCATTCTTCTAATGGCGTGCCTCAATTTTCATCTTCTTCTGCAACAACACCATCAACTTTCACTCCCTATTATGCTCCATTTTTAGCTAATTCGTCATCATCAACAACAACAACAATGGTGGAAAATAATAGTGATGCATTAAGGCAATTCAACCATATTCAGATCTTGAGTTCTCAAGTGATGCCTCATCCCTTTATTCCATCATCTTCTCTTCTTCACTCAATCAATAGTAATAATAATAATGATAATAACTCAGCTGCTGCTACTATCAGGCGTATTCCAATGCCATTTAGTTCTAAGCTTCTTGATTCAGATAACAACAACAATGAGAGTAACCAGGAAGATCATAAAGGTACGTAG 1041 0.4188 MSSSKSSYEAKQEDEGGGGTSSSRQWTAFRNPRIVRVSRSLGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLGQPSKVIDWLLQATKLDIDKLPPLQIPPGFAQFHHHQTLIPLSHHHQFSLGGFYDANSTRFWDLDSSSISLKGKESDTITHPAGVISEKGKWIKTNQHVDENQDGLLLLNNAMGYNSPSGLTLSSSSSSSQFGSHALLFPSQQLLDPHSSNGVPQFSSSSATTPSTFTPYYAPFLANSSSSTTTTMVENNSDALRQFNHIQILSSQVMPHPFIPSSSLLHSINSNNNNDNNSAAATIRRIPMPFSSKLLDSDNNNNESNQEDHKGT 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02234 346 MobiDBLite consensus disorder prediction 1 25 - -
Aip01g02234 346 MobiDBLite consensus disorder prediction 324 346 - -
Aip01g02234 346 ProSiteProfiles TCP domain profile. 43 101 IPR017887 -
Aip01g02234 346 Pfam TCP family transcription factor 43 111 IPR017887 -
Aip01g02234 346 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 344 IPR005333 GO:0003700
Aip01g02234 346 PANTHER TRANSCRIPTION FACTOR TCP17 2 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02234 Aip-Chr1 118448679 118449719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02234 26 186 TCP Transcription Factor Family AT5G60970 54.545 4.06e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aip01g02234 TCP 4.4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02234 - - cam:101498052 268.855