Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02216 ATGGTTGATCTCACTGCTTTCTTAGATTCTTCAACAGGATGCAGATTTTTTCCCTCACCGACAGTAGACTATAAGAGACCAACCTATGAAGAAGTTGAGAACCTCCAAGCTTTACTTCCAAGGGAGTGCAATATCTGCCAAATGCAAATCGGCGAAATGAGACACATGGAGAAGCCACCGGAGAATCAGTCCAGCCACTTGAAAAATAACTCCTCCACCACCGCCAACCACCACAAGCAAGAAGGAGTGAATAACAATGGCAACCGAACAAAGTACCGTGGCGTGAGGCAGAGGCAGTCAGGCCGTTACACGGCGGAGATAAGAGACCCTCAGTCCAAGAAGCAGCGGTGGCTCGGCACCTACACCACACCGGAGGAAGCTGCTCGTGCCTACGATGCCGCCGCCCGAGCCCTTCGCGGCCATAAGGCCTGGACCAATTTCCTCGATTACCCTACTAATAACAACAACGACCTCGAAAACCCTAACCCTTTTTTGTCTTTTTCTTCCTCCTCCAACATACTTCTTCTCCGATTTCTTCTGGACTTCATCAACTCCTCCTCCAACCCCTCTTTGGTCTTTTCCGCTCAGCAACTCTACGATCAGTTGTTGCTGAACGGAATAAGCAGCAGCAACAACAACAATAACTGCAGATTAACAGAGACAGTGTTCTCTCACGAGATTATGAGGAACGGTAATTATAATAACTCGGGTGTCCTTTTTGGTCATTTTCCCATGCAAACTGATTTTGATGGTGATTTTAATAATAAGAATAATAACTTTAGTAGTACTAATATGGTTGACAATGGTCATTTGATGGAAGAAGGAAGTGTGTTTCAGTGCCCTGAGATTCATAATCATCATCCTCATGATGAGGAGGATCTTCTTGCGGCATTCTGGATGGATGAAAGTAATACCAGTGTTGATGCGTTCAAATAA 936 0.4551 MVDLTAFLDSSTGCRFFPSPTVDYKRPTYEEVENLQALLPRECNICQMQIGEMRHMEKPPENQSSHLKNNSSTTANHHKQEGVNNNGNRTKYRGVRQRQSGRYTAEIRDPQSKKQRWLGTYTTPEEAARAYDAAARALRGHKAWTNFLDYPTNNNNDLENPNPFLSFSSSSNILLLRFLLDFINSSSNPSLVFSAQQLYDQLLLNGISSSNNNNNCRLTETVFSHEIMRNGNYNNSGVLFGHFPMQTDFDGDFNNKNNNFSSTNMVDNGHLMEEGSVFQCPEIHNHHPHDEEDLLAAFWMDESNTSVDAFK 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02216 311 MobiDBLite consensus disorder prediction 57 102 - -
Aip01g02216 311 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF084 61 184 - -
Aip01g02216 311 Gene3D AP2/ERF domain 90 148 IPR036955 GO:0003700|GO:0006355
Aip01g02216 311 PRINTS Ethylene responsive element binding protein signature 114 130 IPR001471 GO:0003700|GO:0006355
Aip01g02216 311 PRINTS Ethylene responsive element binding protein signature 92 103 IPR001471 GO:0003700|GO:0006355
Aip01g02216 311 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 61 184 - -
Aip01g02216 311 CDD AP2 90 147 IPR001471 GO:0003700|GO:0006355
Aip01g02216 311 Pfam AP2 domain 90 141 IPR001471 GO:0003700|GO:0006355
Aip01g02216 311 SMART rav1_2 91 155 IPR001471 GO:0003700|GO:0006355
Aip01g02216 311 MobiDBLite consensus disorder prediction 63 94 - -
Aip01g02216 311 SUPERFAMILY DNA-binding domain 91 148 IPR016177 GO:0003677
Aip01g02216 311 ProSiteProfiles AP2/ERF domain profile. 91 148 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02216 Aip-Chr1 117080500 117083483 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02216 30 187 AP2-EREBP Transcription Factor Family AT1G24590 39.873 1.98e-22 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aip01g02216 AP2 1.9e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02216 - - aip:107611489 446.817