Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02181 ATGTATTTGCAGTTGCTGATGTTGCTTACAGTGGAGAGAGCGGAGCCGCAAGTTCTTGAATCAAATCCAATTTTAGAAGCCTTTGGAAATGCTAAAACTATGAGGAACAACAATTCGAGTCCGTTTGGTAAATTCGTTGAGATCCAATTTGATAAGAATGGAAGAATCTCAGGAGCAGCCATTAGAACATACCTTTTAGAAAGATCTAGGGTTTGTCAAGTAAATGATCCTGAACGCAATTACCACTGCTTCTATCTTCTCTGTGCTGCACTGCAGGAGGAAGTTGAGAAATACAAATTAGGACATCTAAAACATTTCATTACCTTAATCAGTCAAAATATTTGCGATGGTGTTGCTGTGGCATCCCTCCTCAATGCAACTCTTGTATTCCTAAGTTTCTTTACAACAACGTTTGGAACGACTCCAGTCAAACACAGCATTGAAGGTATAACAAGAGAAAAGGCTAAAGCAAATGGGTGCAACAGTGAGGAATGCAGGGTCATATATAGAGAGACTGAAGCTGAATCAAGAAAGAGAGAAATTGGCAAGAAAGGTTATGGAAAAAATGTTTGTGGAACAATTATCTGA 588 0.3878 MYLQLLMLLTVERAEPQVLESNPILEAFGNAKTMRNNNSSPFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQVNDPERNYHCFYLLCAALQEEVEKYKLGHLKHFITLISQNICDGVAVASLLNATLVFLSFFTTTFGTTPVKHSIEGITREKAKANGCNSEECRVIYRETEAESRKREIGKKGYGKNVCGTII 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02181 195 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 102 IPR027417 -
Aip01g02181 195 PANTHER MYOSIN 13 116 - -
Aip01g02181 195 Pfam Myosin head (motor domain) 11 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip01g02181 195 Gene3D Kinesin motor domain 9 167 IPR036961 -
Aip01g02181 195 SMART MYSc_2a 1 195 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip01g02181 195 ProSiteProfiles Myosin motor domain profile. 1 195 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip01g02181 195 PANTHER MYOSIN-9 13 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02181 Aip-Chr1 115535902 115537187 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02181 15 106 Myosins gene family AT1G08730 88.043 7.15e-52 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02181 K10357 - oeu:111412362 172.94