Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02162 ATGCTTCCATTTTTCCTTGCTTCCGCTGTAATGGCCTTAGAAGCAAGTAATAGAGCTAAGGAAGAGATTAGCCGGTATGAGCTCACAACTTCAACTAACTCAAAGACGACTACTGATGAATTCCTCAAGTGTAAGGAAAAAAATGAAAACGGCTATGATAAAACTACTGATGGTAAGGAGGCAGCTATTTTGAGTGCAAATGATTTTTTGAATCAGCAATGTGTAAGTTATGAAGAAGCGTACCAATGTTATGTAAGGTATGCCAAGTGTGTGGGGTTTGGAGTTCGAAAGGGGGATGCGGCTGCTGATAGTATTGGCAATTATGTTCGACGTAAATTCTTGTGCAATAGAGCAGGTGTGAGAGAGAAGAAATGCTACGCAACTACTAGTAAGATAAGAAAGCAGAAGCCTGAGACCAGAACAAATTGTAATGCAATGTTGTCAATTTATCTTGACAAGAGTTGTTCAATGTGGAAAGTTAGAAAGATTGTGGAGGATCATAACCACCCTTTGATATTGCTTAAATTAGTTCACCAAATTTCAAATTATCGTACAATGATAGATGCAGACAAAGCACAAGTGGATAGCATGCATAGACATGGCCTCCCACCTTCGAAGATCATGGGTCTTATTGCTGGACAAGCCGGTGGTTATGAATTTGCAAAAGATTTGGATAACTATATTGAAAGAAATCTACGTTCAAAGATCATTGAAGGAGATGTAAATGCAACTCTTAATTATTTGCATGGAAAAGCAGAGGATGAACCTATAATGATTGTGAGACATAGTTTAACAGATGACGATAAATTGGAGCATTTATTCTGGGCGGATGATTTAAGTCAATTTGACTATCAATATTTTGGTGATGTTCTAGCATTTGATTCTACCTAA 891 0.376 MLPFFLASAVMALEASNRAKEEISRYELTTSTNSKTTTDEFLKCKEKNENGYDKTTDGKEAAILSANDFLNQQCVSYEEAYQCYVRYAKCVGFGVRKGDAAADSIGNYVRRKFLCNRAGVREKKCYATTSKIRKQKPETRTNCNAMLSIYLDKSCSMWKVRKIVEDHNHPLILLKLVHQISNYRTMIDADKAQVDSMHRHGLPPSKIMGLIAGQAGGYEFAKDLDNYIERNLRSKIIEGDVNATLNYLHGKAEDEPIMIVRHSLTDDDKLEHLFWADDLSQFDYQYFGDVLAFDST 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02162 296 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 41 296 IPR031052 GO:0006355
Aip01g02162 296 Pfam FAR1 DNA-binding domain 84 171 IPR004330 -
Aip01g02162 296 PANTHER OS03G0181600 PROTEIN 41 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02162 Aip-Chr1 115246987 115250106 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g02162 FAR1 1.4e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02162 - - aip:107611226 581.637