Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02149 ATGGCGCTGTTCAGAAGGTTCTTCTACCGGAAGCCGCCGGATCGGCTTCTAGAGATCTCCGAGAGAGTTTATGTTTTTGACTATTGCTTCTCTACGGATGTCTTGGAAGAAGATGAGTATAGAGTTTATATGGGGGGGATTGTGGCGCAGCTACAGGATCACTTTCCAGATGCTTCTTTCATGGTGTTCAACTTCCGAGAAGGGGATAGACGCAGCCAAATCTCAGATATATTTGCTCAGTATGACATGACGGTTATGGAGTACCCTCGGCAATACGAGGGTTGCCCCCTTCTGCCATTGGAGATGATCCATCACTTCCTTCGATCAGGTGAAAGCTGGTTGTCTTTGGAGGGGCAACAAAATGTGCTTTTGATGCACTGTGAAAGAGGAGGTTGGCCCGTGCTGGCATTTATGTTAGCAGGTCTTTTATTATACCGTAAACAGTACACTGGGGAGCAGAAAACTCTTGAGATGGTGTACAAGCAAGCTCCGAGAGAACTCCTACACCTTTTATCTCCCTTGAACCCACAACCTTCACAGTTGAGATATCTTCAGTATATTTCAAGGAGACATTTGGGTTCTGAGTGGCCCCCTTCTGAAACACCCTTGTATTTGGATTGTCTGATTCTTAGGGTCCTTCCGTTATTTGATGATGGAAAAGGTTGCAGGCCTGTGGTACGTGTGTATGGTCAAGACCCTTCAAATCCTGCTAATAGAAGTTCGAAGCTTCTTTTTTCAACTTCGAAATCCAAAAAGCATGTTCGCCACTACCTGCAGGCAGAGTGTATTTTTGTGAAAATCGATATCCGTTGTCGTGTTCAAGGGGATGTTGTTCTTGAGTGCATACATTTGAGTGAAGATTTCACTCGTGAGGAGATGATGTTTAGAGTCATGTTCCATACTGCATTTGTGCGGTCAAATATATTGTTGCTGAGCCGTGATGAAATTGATATATTGTGGGATGCAAAAGATCAATTTTCTAGGGATTTCAAAGCAGAGGTGCTTTTCTTGGATGCTGATGCTGTTCTACCTGATCTAACCACAGTCGCAGCGAATGATGATGCAAATGAAACTGAAAGTGCCTCCACTGAAAGTGCTTCACCTGAGGAGTTTTATGAAGTGGAAGAGATTTTTAGCAATGTAATTGATGGACAGGAAGGTAAAGATGATGGGCTTCAAAAACGGCTCGATGAGATGGATTCTGGTATTAATGAAGTGAAAGACATCTCTGTTGATGATGTGAAATACAAGCTTGATGAGAGCATGGATTCAGATCCTCATGCAGTGAAGGACATTGCTGTGGATGATGGAAAAATTAAGTCAACCGCTGCAATATTTTCAGACATGAAAACAATGGAAATCGATGTGGATGTGAACCAGGAAATGGTAATCCAAAACAAATATGATGAAGATAACAAAGCTATAGAAAGGGACTTAGAATCCAAGGCAGGGCAGCAGATAGCTGATATTGCAAGACAAAAATCAGGTAAACTTGTTCCATTGGCTCCGAAGAAACAACCTCCATCAAACTCAAAGCCAATGGGAGATTCAATTACAACAAAGCAAAAGACTAAACAGCAAGAAACCCAAGGTTTTCAGTCAAAACAAGCTAAGCCTACTGCAGTAACTCAATGGATTCCTTCTAACAAGGGTTCTTACACAAACTCAATGCATGTATATTATCCATATAGGAACAATAGTGCACCTGCAGCACTTACAAATTATACAGCTCCAAAGGATAAAATGGAAGATACCAAAGTGAAGTCTTCATCTGCGTCTGCTGCTTCTACTGACACGAGAATTGAACTGAAAAGTCGCAAGGTGGCCCCTACAAAATCTTCAGGCAACACAGTAGTAGGATTGGATGCTAACCGCCCTCAATCATTACCATCTGTTAAAGAAACATCTTTTGAGTTAGTTACAGAAGCAGATCAACAGAGCTCAGAGAAAGAGCTACGGCCTCCACCACCGCCTCCTCCTCCTCCTCCACCTCCACCACCTCCGCGAAGAAACTTTTCTTCACATGTTTTTGAACCCTTATCGTTTCAGGATGATGTATCAAGTCAAGCATCTCAATCTCCACTGGTATCCTCAACCTCTTTGGGTGGAAATGTGTCTACTGCACAAGCCCCGCCACCTCCACCACCACCACCGCCGCCATTTTCAAGATCAATTAGTAAACAAAAAGTAGGGATAAATTTACAACCTGCAACTTCTCCTCCTCCCGCTCCACCCCCAACTCCACCACCACCCCCATTTTTTGGGCAAAACAAGGGGAGCTTACAACCTTCTGCATCCTCTTGGAAGTCTCTTAGAGCTCCACCGCCACCACCGCCACCTCCTTTTAGTAGAGCTCCACCGCCACCACCGCCACCTCCTTTTAGTAGAGCTCCACCTCCCCCACCGCCACCTCCTTCTAGTGGAGATCCGACTCCCTCGCCACCACCACTTTTGACTAGAGCTCCATCTCCTCCACCACTTCCTCCATTACGTGGAGGCCCACCTGCACCTCCACCTCCTCCAATGTCTAGAGCCCCAGCTCCTCCACCTCCCCCTATTCGTGGAGCACCACCTCCTGCTCCTCCTCCTCCTATGCGGGGAGCACCCCCTCCTCCACCACCACCTGGGGGTCGAGGTGCACCTGCTCCGCCACCTCTTGGTAGTCGAGGCCCTCCTCCTCCACCTCTTCCTGGTGCTTCCGGTGCTCCTCCTCCACCTAGACCTCCTGGTGGCGCACCACCACCTCCACCCTTGGGTTCAAAAGGTTCAAATGTTGGAGCTGATCCAAGAGGAAGAGGGCGTGGATACGTGCGCCCTGCAGGAGCAGGTGCGGTTGCACCTCGACGGTCCTCCTTAAAGCCATTGCACTGGAGTAAGGTTACAAGGGCATTGCAAGGAAGTTTATGGGAAGAATTACAAAGATTTGGAGAACCTCAAATTGCACCAGAGTTTGATGTTTCAGAGCTAGAGAAGCTTTTCTCTGCAAATGTTCCAAAACCTTCTGATTCAAGTGGTAAATCTGGAGGGCGGCGCAAATCTGTTGGATCTAAAACTGACAAAGTCCACTTGATTGACCTAAGGAGGGCTAACAATACTGAAATTATGCTCACTAAGGTTAAGATGCCACTTCCTGATATGATGGCTGCTGTGCTGGCTATGGATGAATCAGTATTAGATGTAGATCAGGTGGAAAATCTCATTAAGTTTTGTCCTACCAAAGAAGAGATGGAACTTTTGAAGGGATACACTGGTGACAAAGAGAATTTGGGAAAATGCGAACAGTATTTTTTAGAGCTGATGAAGGTGCCACGAGTAGAGTCAAAGTTAAGAGTATTCTCTTTCAAGATTCAATTTCTGTCTCAGGTTACAGAATTTAAGAAGAGTTTAAACGCTGTGAACTCTGCTTGTGAAGAGGTCCGAAAGTCTGTCAAGCTGAAGGAGATCATGAAGAAAATTCTTTTTTTGGGTAATACACTAAATCAAGGAACAGCTAGGGGTATGATCCACAATTGGATTCAAGACTTCAAGTTGGATAGTCTTTTAAAGCTTACTGACACTCGTGCTTCTAACAATAAGATGACACTGATGCACTATCTTTGCAAGGTTCTAGCTGATAGGTCGCCTGGACTGCTTGACTTCCACTTAGACCTTGTAAGCCTGGAAGCTGCGACTAAGATACAATTGAAGTCCTTAGCAGAAGAGATGCAGGCAATCATCAAGGGACTAGAAAAGGTTAAACAGGAGCTTGCTGCATCTGCAAATGATGGACCTGTGTCCGAAGTTTTCTGTAAGACATTGAAAGAATTCATATCTGTTGCTGAGTCAGAGGTAGCATCTCTGACAAGCCTGTATTCCGTGGTGGGTAGAAATGCAGATGCACTCGCACTATATTTTGGCGAGGATCCTGCTCGTTGTCCATTTGAACAAGTCACCACAACTCTCTTAAATTTTATAAGGTTATTTCGGAAAGCGCACGAAGAGAATTGCAAGCAGGCAGAGTTAGAGAAGAAAAGAGCCGAGAAAGAGGCCGAAATGGAGAAGGCTAAGGGCGTTAACTTGACAAGGAAGAGTGCAAAAGATAGTTGA 4086 0.4535 MALFRRFFYRKPPDRLLEISERVYVFDYCFSTDVLEEDEYRVYMGGIVAQLQDHFPDASFMVFNFREGDRRSQISDIFAQYDMTVMEYPRQYEGCPLLPLEMIHHFLRSGESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYTGEQKTLEMVYKQAPRELLHLLSPLNPQPSQLRYLQYISRRHLGSEWPPSETPLYLDCLILRVLPLFDDGKGCRPVVRVYGQDPSNPANRSSKLLFSTSKSKKHVRHYLQAECIFVKIDIRCRVQGDVVLECIHLSEDFTREEMMFRVMFHTAFVRSNILLLSRDEIDILWDAKDQFSRDFKAEVLFLDADAVLPDLTTVAANDDANETESASTESASPEEFYEVEEIFSNVIDGQEGKDDGLQKRLDEMDSGINEVKDISVDDVKYKLDESMDSDPHAVKDIAVDDGKIKSTAAIFSDMKTMEIDVDVNQEMVIQNKYDEDNKAIERDLESKAGQQIADIARQKSGKLVPLAPKKQPPSNSKPMGDSITTKQKTKQQETQGFQSKQAKPTAVTQWIPSNKGSYTNSMHVYYPYRNNSAPAALTNYTAPKDKMEDTKVKSSSASAASTDTRIELKSRKVAPTKSSGNTVVGLDANRPQSLPSVKETSFELVTEADQQSSEKELRPPPPPPPPPPPPPPPRRNFSSHVFEPLSFQDDVSSQASQSPLVSSTSLGGNVSTAQAPPPPPPPPPPFSRSISKQKVGINLQPATSPPPAPPPTPPPPPFFGQNKGSLQPSASSWKSLRAPPPPPPPPFSRAPPPPPPPPFSRAPPPPPPPPSSGDPTPSPPPLLTRAPSPPPLPPLRGGPPAPPPPPMSRAPAPPPPPIRGAPPPAPPPPMRGAPPPPPPPGGRGAPAPPPLGSRGPPPPPLPGASGAPPPPRPPGGAPPPPPLGSKGSNVGADPRGRGRGYVRPAGAGAVAPRRSSLKPLHWSKVTRALQGSLWEELQRFGEPQIAPEFDVSELEKLFSANVPKPSDSSGKSGGRRKSVGSKTDKVHLIDLRRANNTEIMLTKVKMPLPDMMAAVLAMDESVLDVDQVENLIKFCPTKEEMELLKGYTGDKENLGKCEQYFLELMKVPRVESKLRVFSFKIQFLSQVTEFKKSLNAVNSACEEVRKSVKLKEIMKKILFLGNTLNQGTARGMIHNWIQDFKLDSLLKLTDTRASNNKMTLMHYLCKVLADRSPGLLDFHLDLVSLEAATKIQLKSLAEEMQAIIKGLEKVKQELAASANDGPVSEVFCKTLKEFISVAESEVASLTSLYSVVGRNADALALYFGEDPARCPFEQVTTTLLNFIRLFRKAHEENCKQAELEKKRAEKEAEMEKAKGVNLTRKSAKDS 1361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02149 1361 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Aip01g02149 1361 MobiDBLite consensus disorder prediction 737 756 - -
Aip01g02149 1361 MobiDBLite consensus disorder prediction 770 920 - -
Aip01g02149 1361 PANTHER FORMIN-J 783 1352 - -
Aip01g02149 1361 PANTHER FORMIN-J 1 771 - -
Aip01g02149 1361 MobiDBLite consensus disorder prediction 651 672 - -
Aip01g02149 1361 MobiDBLite consensus disorder prediction 609 643 - -
Aip01g02149 1361 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
Aip01g02149 1361 Coils Coil 1228 1252 - -
Aip01g02149 1361 SMART it6_source 572 1361 IPR015425 -
Aip01g02149 1361 Pfam Formin Homology 2 Domain 948 1321 IPR015425 -
Aip01g02149 1361 MobiDBLite consensus disorder prediction 1339 1361 - -
Aip01g02149 1361 Gene3D - 205 336 - -
Aip01g02149 1361 MobiDBLite consensus disorder prediction 491 549 - -
Aip01g02149 1361 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Aip01g02149 1361 Gene3D Formin, FH2 domain 944 1333 IPR042201 -
Aip01g02149 1361 ProSiteProfiles Formin homology-2 (FH2) domain profile. 942 1347 IPR015425 -
Aip01g02149 1361 Coils Coil 1322 1356 - -
Aip01g02149 1361 MobiDBLite consensus disorder prediction 995 1017 - -
Aip01g02149 1361 SMART PTEN_C2_2 198 338 IPR014020 -
Aip01g02149 1361 MobiDBLite consensus disorder prediction 676 707 - -
Aip01g02149 1361 MobiDBLite consensus disorder prediction 510 549 - -
Aip01g02149 1361 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Aip01g02149 1361 MobiDBLite consensus disorder prediction 570 948 - -
Aip01g02149 1361 MobiDBLite consensus disorder prediction 997 1011 - -
Aip01g02149 1361 MobiDBLite consensus disorder prediction 708 723 - -
Aip01g02149 1361 SUPERFAMILY Formin homology 2 domain (FH2 domain) 904 1341 - -
Aip01g02149 1361 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02149 Aip-Chr1 114880952 114891274 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02149 1 600 FH2 protein (formin) Gene Family AT5G07740 60.681 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02149 - - adu:107468267 1366.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02149 01 114880952 114891274 Aip01g02149 01 114880952 114891274 ECH