Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02145 ATGGAGAATGATGGCAAAGAGTCATATAAGGATGGTGATCAATCTGAGGATTTAAGTGTTGAGTATGAGTGCAGTTCCGATGAAAGTGATGATATGGTGGATGTAACTGTAGATGAAGCAGAGGCAGATATAATTAATGCTGATGGTTTTGAAAAGTTGATAACTGATTTGACCATCGAAGACATACGGGGACTGGTGTTTGATACAGAATCTCAAGTTTGTAAATTTTATGCCAAATATGCCAAGTGCTATGGATTTGTGTCCCGAAAAGACTTGAAGACGGTGGATGTTAATGGCAACATTAATACAAGACAGTTGGTTTGCAATAAAGTAGGAGAAAGACATTGGAAGCACCTTAAAAGGGACAATCGGCAAAGGGAGCATAGGGCAATTACTCGTGTCAACTGCAGGGTGAATATTCGGTTCATTCGTCACTATAGAACGGGGACCAACCACTATGGCCAGACAACTATCTTTGGATGCGCTCTGCTCTCAGATGAAAGGTCCGAAACTTTCAAGTGGGCACTGAAGGAATTTTTGGAAATCATGTCAGGAAAACTACCCGGAGGCGTTGTGACAGACGGAGACCGTGCTATGAGAGAGGCTATCTTAGAAGTATTTCCTGGTATACCACACCGCCTTTGTGCATGGCATCTCCATCGTAATACGAATGAAGTAGGTTACCGCATATTTGAGGGAGTACTTCTTTGGCCGCATAAGAACTACATCACAGTAAAACCATCTTACTTGAAGAACTATGTTGACAGTAAAACCATTCTCCTTGAATTCATGCATAAATTCAGTGAAGTACTAAGGCATTACCGAAACAACCATCTTACTGCTGAATTTGAAACCTTTTATAAGTTTCCTGTTTTGACTACGTGCTTGGAAAGTTTTGAGAAACAAGCTGCCGAACTTTATACTAGAAATATTTTCAGACTTGTGAATGATGAGATAGAAGCTGCAGGTGCCTTAAATGTGACTGAATGCCCAAACAGTGGAGACATTGTTGAGTACAACCCGAGCTATTTGAGACTGGTGGATTACCGTGCTCCCACATCTTTGGGGTCTTGA 1074 0.4134 MENDGKESYKDGDQSEDLSVEYECSSDESDDMVDVTVDEAEADIINADGFEKLITDLTIEDIRGLVFDTESQVCKFYAKYAKCYGFVSRKDLKTVDVNGNINTRQLVCNKVGERHWKHLKRDNRQREHRAITRVNCRVNIRFIRHYRTGTNHYGQTTIFGCALLSDERSETFKWALKEFLEIMSGKLPGGVVTDGDRAMREAILEVFPGIPHRLCAWHLHRNTNEVGYRIFEGVLLWPHKNYITVKPSYLKNYVDSKTILLEFMHKFSEVLRHYRNNHLTAEFETFYKFPVLTTCLESFEKQAAELYTRNIFRLVNDEIEAAGALNVTECPNSGDIVEYNPSYLRLVDYRAPTSLGS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02145 357 Pfam MULE transposase domain 148 222 IPR018289 -
Aip01g02145 357 PANTHER OS02G0262500 PROTEIN 148 223 - -
Aip01g02145 357 PANTHER OS02G0262500 PROTEIN 65 149 - -
Aip01g02145 357 MobiDBLite consensus disorder prediction 1 30 - -
Aip01g02145 357 MobiDBLite consensus disorder prediction 1 17 - -
Aip01g02145 357 Pfam FAR1 DNA-binding domain 75 144 IPR004330 -
Aip01g02145 357 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 148 223 IPR031052 GO:0006355
Aip01g02145 357 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 65 149 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02145 Aip-Chr1 114790967 114792745 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g02145 MULE 2.1e-18 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02145 - - ahf:112701630 310.457