Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02138 ATGTTCAACAATGAGGGTGAAGAGTCAGATGGGGGTAGCTCGGAGTATCGCTGGGCACAATATTGTGGGAGCGACGAAGATTATGATGTCGAGGAGAGCCTTGAGGCCCGACGGGAGGCCGAAGCAGGAAAGAGGTGTGAAGCGGATACTGTTTACGATGAGGGGGCTTTTGGTGCTAATGATGTGGAAGGTGGAGGTCCCAGCCGACAAGTCGCCGCGGAAGACTTCTTGGGTAGAGAGTTTGGTACGGAGGAGGATGCCTATGATGCCTACAAGGAATTCGCCAGATTCAGGGGTTTTGGCGTTCGGAAGGGAGATGTCGGTCGTGTCAATGGGATTTTGATAAGGAGAGACTTTTTTTGCCATCGACAAGGTACTAGACATCGTAAGCACTATGATCGACCTGAGCGAGTAAGAGAGGAGAGGCCTGAGAGTCGAACAGACTGTAAGGCCAAACTGAAGATTTACTACGATATGCAAAAGAGTGTGTGA 492 0.5061 MFNNEGEESDGGSSEYRWAQYCGSDEDYDVEESLEARREAEAGKRCEADTVYDEGAFGANDVEGGGPSRQVAAEDFLGREFGTEEDAYDAYKEFARFRGFGVRKGDVGRVNGILIRRDFFCHRQGTRHRKHYDRPERVREERPESRTDCKAKLKIYYDMQKSV 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02138 163 Pfam FAR1 DNA-binding domain 91 157 IPR004330 -
Aip01g02138 163 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 57 158 - -
Aip01g02138 163 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 57 158 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02138 Aip-Chr1 114696259 114696750 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g02138 FAR1 4.3e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02138 - - aip:107615800 201.06