Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02121 ATGGTTTTGCAAGATGAGCAGGGTGATAGAATTCATGCAACGATATGTAAGCATGGGTTGGATTTGTTCAGGGAGAGGATAAAAGAGCATGCCGTGTATAGTATGCCAAATTTTATTCTGAAAATTAATAATGGGAAGGTAAGGACAACTGCTCATAACTACAAGCTTAGCTTCTATAGAAAGATAGACGTGGAAGTCCTTCCAATCGAGACTTTTGCTTTTAACCCATTCAAAATGTGCCCCTTTGCTGAACTTGAGGCAAATGCTCCAATGGATGAAAATTTGTTGTTTGATGAGATCAATGCAGGCATTGCCCCAATACGCACCATAGAGGATGTTCTTAATATGATACAGGAAACCTCCTACTGGATTGTGGGAAACATTGTGTCTTTAGAGATTGGTAAAGATGACTGGTCCTATACGTCATGTAAGACATGTCCAAAGAAAGTTCTAGAGAGCAAAGATATGTATTGGTGTGATCATTGTAGGCGTGTAGGCTTCAAGGCTATACTAAGCGGTGATGTGCTGCTGAGATGTTGTTCCATGTATAAGTTGCAAGTAATCGTGACTGATGAAAGTGGTTGTATGAAGCTCCTTCTGTGGAACAAAGAAGTAGAGCAAATGGTGGAAAAGGCTGCTGAGAAAATTAAAGAGTTATGCGATTCAGCAGTTGAGATCAACGGTGATAGCTCCTACGAGACTCCAGCCAAGAGGTCCTCCCCTGATACAGGTGATGGCTCTACGGTAGAAGCAGGTGTGTCTGCAGATGTGCAAGCATCAACTAATGAGACTTTTAAGAGGAATTGTGGAAAAAAAATAACTGGATTCAAAACTTTTGATGTTAGTTACATTGTTGGTGTGTTTAAGAAGCTGTGA 876 0.4064 MVLQDEQGDRIHATICKHGLDLFRERIKEHAVYSMPNFILKINNGKVRTTAHNYKLSFYRKIDVEVLPIETFAFNPFKMCPFAELEANAPMDENLLFDEINAGIAPIRTIEDVLNMIQETSYWIVGNIVSLEIGKDDWSYTSCKTCPKKVLESKDMYWCDHCRRVGFKAILSGDVLLRCCSMYKLQVIVTDESGCMKLLLWNKEVEQMVEKAAEKIKELCDSAVEINGDSSYETPAKRSSPDTGDGSTVEAGVSADVQASTNETFKRNCGKKITGFKTFDVSYIVGVFKKL 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02121 291 CDD RPA1_DBD_A_like 1 60 - -
Aip01g02121 291 Coils Coil 202 222 - -
Aip01g02121 291 Gene3D - 1 66 IPR012340 -
Aip01g02121 291 Gene3D - 99 240 IPR012340 -
Aip01g02121 291 MobiDBLite consensus disorder prediction 230 250 - -
Aip01g02121 291 SUPERFAMILY Nucleic acid-binding proteins 1 68 IPR012340 -
Aip01g02121 291 Pfam Domain of unknown function DUF223 1 65 IPR003871 -
Aip01g02121 291 SUPERFAMILY Nucleic acid-binding proteins 106 222 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02121 Aip-Chr1 114242776 114245185 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02121 140 240 Core DNA Replication Machinery Family AT5G61000 32.353 5.47e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02121 - - aip:110265210 190.66