Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02119 ATGGACTCTGACGAGGATATGCATGACACCAATGACCTTGAATCCCTTGACGACGATTACTATAGTGGCGGCCCGGAGGATGCTGCCATGAATTACTACAGCGACTACGATCAAGATGCCGATGATTACTTTAATGAAGCTGATGATCCTAAAAGGCTCGAGTCTCGTCACCCTGAGAGTGTCAGTAAAGTGCATGATGCATGGTTTGCTGATGAAAGTCAAGTCGGCAAAGCAGTTGGCTTGTTGGATAAACCAATCATTAGGCATGCTAATGCTAGAGAGCCTTCAGCCACCCACCAAACCCCCGAAGCTCTCAGCCAGTCAGCCTCCTCCCCTTTCTTCCCCCCTCATCCACCAAGGCCACCATTGCCACCGCCCACCAAGCTCCAGATTCCAGCAGTGCTCCTCATTCGTGACCCAGCATCGCTCCCCATTCGCCACCCAGCAGCGCTCCTCAGCAGCCGCGACCACCACCGCGTTGAGCCCGCCTCCTCGTCGCCGAACCTCGACGAGCTCGCCGAGCCCGCATCGCATTCGCCGGTAAGACCTGTTTTCTTGTCTTCTTGA 567 0.5485 MDSDEDMHDTNDLESLDDDYYSGGPEDAAMNYYSDYDQDADDYFNEADDPKRLESRHPESVSKVHDAWFADESQVGKAVGLLDKPIIRHANAREPSATHQTPEALSQSASSPFFPPHPPRPPLPPPTKLQIPAVLLIRDPASLPIRHPAALLSSRDHHRVEPASSSPNLDELAEPASHSPVRPVFLSS 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02119 188 MobiDBLite consensus disorder prediction 90 128 - -
Aip01g02119 188 MobiDBLite consensus disorder prediction 94 111 - -
Aip01g02119 188 MobiDBLite consensus disorder prediction 45 63 - -
Aip01g02119 188 MobiDBLite consensus disorder prediction 1 63 - -
Aip01g02119 188 MobiDBLite consensus disorder prediction 112 128 - -
Aip01g02119 188 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 57 94 IPR031127 GO:0004842|GO:0016567
Aip01g02119 188 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 57 94 - -
Aip01g02119 188 MobiDBLite consensus disorder prediction 148 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02119 Aip-Chr1 114209133 114211651 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02119 60 113 ARIADNE family AT1G05890 38.983 2.44e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02119 K11968 - ahf:112777829 143.665