Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02076 ATGTCCAACCCAGCTAGCTTCTGGACACAGGCTAACGCTCTTCTCCGCAAGAACTTAACTTACCAGAAACGCGATGTCAAGACCAACGTGAGGCTGGTGCTGTTCCCGGTGATCCTCGTCGTACTGCTCTACGCGCTCCAAACGGCGGTCGACATCGTGCAGAGAGCGTCGCTTCAAGACGAGGAGAAGACGAAGGCCGCCGCCTGCAAAGGCTGCGTCTGCGTTCACGACATCGGGCCCCATGCCAAGTGCCCGGATTCAGAGAAGGTGTGTGGGCCCCGATTCTTGGGCCAAGAGGATGCCAAGAAGTGTCCCGTACCCTACCCACCGGAGTGGCCTCCCCTTTTGCAACTTGACGTCGGCGACGGATTCTTCAGCAATGATGCCGCCCGCAATGTCACCATGCTCTTCACTGGCACTGACCAATTTTTTGGAGAAAGTTTATTTGGAACTATGTTCCCAACTGAGTTGAGTATAAATGAGTCTGATATCATGGCTAGTTTGGCATCAGTTGTTCTGGGAACTGAATTTGGGTTGGATTCAACCCTTTTTGTGGACCCTGCGTTAAGTATTAACTCTTATATCCTTTATCGTCTACAACAAGATCAGTGTAAGGTGAACTCTAGTTTCTCCTTTAACTTCAACGAGGGAGACTCCAAAATGATCCGAGATGTTAAGGTGAATTGTACTCAGGCTTTTACCTTATGGCGCAAGACTTTTTCTGATATATGGGATGAGCTACAAGTTGAAGATTGTGATGATGATACAACAGGTTACACGTTATACAAGAATCCTATTAGTGGAGCTTTTGACTTTCTAAATTCGAATAAGAATATTTTTAATGTTAGCTTTTTAATTTACAAACATGACAATAGAGATAAGATCAACTTGAGCCGCACTCCTCGTTCTGTAAATATGATATCAAATGCCTTCTTGAAGTTTTTGCTGGGAAATGGTACCAAGATGTTATTTGACTTTATAGAGGAAATGCCAAAACCTGCATCCTCAGACACAACAATGATTGATATAACTTCTCTCCTGGGTGGTTTGTTCTATACATGGGTCATCCTTCAACTGTTTCCTGTTATTCTGATATCGTTGGTGTATGAGAAGCAGCACAAAATAAGAATGATGATGAAAATGCATGGTCTTGGAGATGGACCATACTGGTTGATTTCCTATGCTTATTTTCTTGCCATTTCCATGGCCTACATGCTGTGCTTTGTGTTAATGGGTTCATTCTTTGGATTCCATTTCTTCAGAGAGAATAACTATGGAATCCAGTTTGTGTTTTATTTTATCTATGTAAACTTACAAATTGCCTCCGCATTTCTGGTGGCTGCCCTGTTTTCGAATGTTAAGCCTGCTACAGTTACAGCATATATAGTTGTCTTTGGAACTGGACTGGCAGCTGCCTTTCTTTTCCCAGATTTGATGAAGAATGATCTGTTTCCAAAAAAATGGATCATTGTTATGGAGTTGTATCCTGGGTTTGCTTTATTTCGCGGGCTAAATGAGTTTGCAGAATATGTCAGTGTTGGAAATAGTTCAGGGACCCTTGGCATGAGGTGGCAGGATCTGAATGATAGCACAAATGGCATGAAACAGATCTTAATCATCATGTCAATTGAGTGGATAGTTTTCCTTTTTGTTGCTTACTACCTTGATCAAGTTTCCTCATCAGCAAGTGGGAGAAGTCCATTTTTTTTCTTGAAAGGATTTCAGAAGAAGACACCTTTGTCTTCCCAAAAGGACAATATGCCAATACAGGGGTCAAGAGCCTTGGCTCAGATGGATAAACCTGATGTAATCCAAGAGAGAGAGAAAGTGGAGGAACTGCTACTTGAACCGGCCAGCAATCACAGGATAGTTTGCAACAAGCTGAGAAAAGTCTATCAGGGGAGGGACGGAAACCCGGATAAAGTAGCAGTGAGAGGCTTGTTCCTTGCTGTTCCTCAAGGGGAATGCTTTGGCATGCTTGGTCCCAATGGTGCTGGAAAGACTTCTTTTATTAGTATGATGATTGGTCTGACAAAGCCAACCTCTGGTACTGCATTTGTTCAAGGCATGGACATAAGAACTGATATGAATGGACTATACACAAACATGGGTGTATGCCCCCAACATAACTTGCTGTGGGAAAGGTTGACAGGGAGAGAGCACCTACTTTTCTATGGCAGACTTAAAAATCTCAAAGGTTCAGCCTTAACACAGGCAGTAGAAGAATCTTTGAAGAGTTTAAACCTTTTCAATGGAGGAGTTGCTGATAAACAAGTTGGAAAATACAGTGGAGGGATGAAGAGGAGGCTTAGCGTTGCAATTTCTTTGATTGGGAATCCCAATGTTGTTTATATGGATGAGCCAAGCACCGGATTAGACCCTGCATCAAGAAAACGCTTATGGGATGTTATTAAGACTGCCAAAAAGGATCGTGCAATTATTCTCACTACTCATTCCATGGAAGAGGCAGAGGCCTTGTGTGATCGATTAGGAATCTTTGTTGATGGTAGCTTGCAATGCATAGGAAATTCAAAGGAGTTGAAAGCAAGATATGGAGGAACTTATGTGTTGACAATGACAACACCTTGGGAGCATGAAAAGGAAGTGGAGAACATGGTACGGCTGCTATGTCCTAATGCTAACAAGATATACCATATTTCTGGGACTCAGAAGTTTGAGCTGCCTAAAGGGGAGGTTAGAATAGCTGATGTATTTGGAGCTGTTGATTTTGCAAAGAGAAACTTCACTGTTTCTGCATGGGGTTTAGCTGACACCACAATGGAAGATGTCTTCATTAAGGTTGCTCGTGGCGACCCCCATTCTCAAAACCTGTCATAA 2838 0.4295 MSNPASFWTQANALLRKNLTYQKRDVKTNVRLVLFPVILVVLLYALQTAVDIVQRASLQDEEKTKAAACKGCVCVHDIGPHAKCPDSEKVCGPRFLGQEDAKKCPVPYPPEWPPLLQLDVGDGFFSNDAARNVTMLFTGTDQFFGESLFGTMFPTELSINESDIMASLASVVLGTEFGLDSTLFVDPALSINSYILYRLQQDQCKVNSSFSFNFNEGDSKMIRDVKVNCTQAFTLWRKTFSDIWDELQVEDCDDDTTGYTLYKNPISGAFDFLNSNKNIFNVSFLIYKHDNRDKINLSRTPRSVNMISNAFLKFLLGNGTKMLFDFIEEMPKPASSDTTMIDITSLLGGLFYTWVILQLFPVILISLVYEKQHKIRMMMKMHGLGDGPYWLISYAYFLAISMAYMLCFVLMGSFFGFHFFRENNYGIQFVFYFIYVNLQIASAFLVAALFSNVKPATVTAYIVVFGTGLAAAFLFPDLMKNDLFPKKWIIVMELYPGFALFRGLNEFAEYVSVGNSSGTLGMRWQDLNDSTNGMKQILIIMSIEWIVFLFVAYYLDQVSSSASGRSPFFFLKGFQKKTPLSSQKDNMPIQGSRALAQMDKPDVIQEREKVEELLLEPASNHRIVCNKLRKVYQGRDGNPDKVAVRGLFLAVPQGECFGMLGPNGAGKTSFISMMIGLTKPTSGTAFVQGMDIRTDMNGLYTNMGVCPQHNLLWERLTGREHLLFYGRLKNLKGSALTQAVEESLKSLNLFNGGVADKQVGKYSGGMKRRLSVAISLIGNPNVVYMDEPSTGLDPASRKRLWDVIKTAKKDRAIILTTHSMEEAEALCDRLGIFVDGSLQCIGNSKELKARYGGTYVLTMTTPWEHEKEVENMVRLLCPNANKIYHISGTQKFELPKGEVRIADVFGAVDFAKRNFTVSAWGLADTTMEDVFIKVARGDPHSQNLS 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02076 945 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 626 860 IPR003439 GO:0005524
Aip01g02076 945 CDD ABC_subfamily_A 623 848 - -
Aip01g02076 945 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 5 938 IPR026082 GO:0016021|GO:0055085|GO:0140359
Aip01g02076 945 Pfam ABC transporter 649 789 IPR003439 GO:0005524
Aip01g02076 945 SMART AAA_5 653 836 IPR003593 -
Aip01g02076 945 Gene3D - 615 882 IPR027417 -
Aip01g02076 945 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 623 851 IPR027417 -
Aip01g02076 945 Pfam ABC-2 family transporter protein 323 554 - -
Aip01g02076 945 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 5 938 - -
Aip01g02076 945 ProSitePatterns ABC transporters family signature. 762 776 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02076 Aip-Chr1 112080148 112087363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02076 639 871 Calmodulin-binding Proteins AT2G36910 25.306 1.60e-14 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02076 - - gmx:100792897 1142.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02076 01 112080148 112087363 Aip01g02076 01 112080148 112087363 ECH