Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02070 ATGGGGTCCGTTAACGACGGCACGCGACGGAAACGTGAGCTGAAGGCGGAGACCAGATGCGGCTGTGAGGTAGAGATGCGCGTCCACGTGCACTCTGAAAGTGGTAGATGGATAATATCATACTTTCAGAATGTTCACAACCACGAGTTGCTAGACGATAGACTGACTTTCATGCTATCGGGCCATAGGAAAATGGATGCAGCCACCCTGGAACAAATGAACATGATGCTTAGAGTTGGGATTAAAACGCCACAGATTTATTCATCTTTTGTGCAAACTGCTGGGGGATTCCAAAACCTTCCGTTTCTAAAGAGGGATATGTATAACCAGATAGGGAAGCAATGGAGGCTCATTGGCAGGGACGCGATGGCTTGCCTTAAGTTACTGGAATCAACGACGCAGGCTAATCCTGGAATGTTTGTGCATTATTTGGCAGACAAAGAGGGTCGTTTGGTGTACCTGTTTTGGTCAGATAATTGCAGTCAACTGGATTATGGTTTGTTTGGGGATGTCATCGCATTTGATGTGACATATCGGAAGAATAAGTATATGTGTCCACTGGTTGTGTTTTCTGGAGTGAATCACCATAACCAAACAATTGAGTTTGCGACTGCGCTAGTTGCAAATGAGAATGAGCAGACTTACACCTGGTTGCTGCAACAGTTCCTGGACGCCATGAAGGGTAAAGCACCTGGGTGTGTGATAACAGATGGGCATGGAGCGATGAAAAATGCAATCGAAGCAGTGTTTCCTGGGGCCTATCACCATTTGTGTGCTAGGTATCTGTTGAGGAATGCCACTTCTAACCTAAGCAACCCCAGATTTACTTCTGAATTTAAGAAATGCATGCTGTTTGATTATGAGGTGTGGGAGTTTGAAGATCATTGGCATTATATGGTGGATGCGCTTGGTCTGTCTGATAATCAATGGGTTTCTGACCTTTACTCTAGGAGAAGGATGTGGGCAACTGCATATATAAGGGGCAACTTCTTTGGGTGTTTTCGTACAACGTCAAGGTGTGAAGGATTGCACTCAATGCTTGGTAAATTTGTCTAG 1056 0.4517 MGSVNDGTRRKRELKAETRCGCEVEMRVHVHSESGRWIISYFQNVHNHELLDDRLTFMLSGHRKMDAATLEQMNMMLRVGIKTPQIYSSFVQTAGGFQNLPFLKRDMYNQIGKQWRLIGRDAMACLKLLESTTQANPGMFVHYLADKEGRLVYLFWSDNCSQLDYGLFGDVIAFDVTYRKNKYMCPLVVFSGVNHHNQTIEFATALVANENEQTYTWLLQQFLDAMKGKAPGCVITDGHGAMKNAIEAVFPGAYHHLCARYLLRNATSNLSNPRFTSEFKKCMLFDYEVWEFEDHWHYMVDALGLSDNQWVSDLYSRRRMWATAYIRGNFFGCFRTTSRCEGLHSMLGKFV 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02070 351 PANTHER OS02G0262500 PROTEIN 10 350 - -
Aip01g02070 351 Pfam MULE transposase domain 171 264 IPR018289 -
Aip01g02070 351 Pfam FAR1 DNA-binding domain 6 51 IPR004330 -
Aip01g02070 351 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 10 350 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02070 Aip-Chr1 111850271 111851326 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g02070 MULE 2.6e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02070 - - ahf:112783567 583.563