Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02067 ATGGAGTTTGCTGCTAGATCTGGTGATGATGGAGGTGATGCACCACTCAAGGAAGAGAAGAAGAGAAGTGACGAGTATACTGATGATAGTGGAAGCCATGGTGATAATCATGATCATGCTCCTTCTAATAAGCAAGACACAACAATTGTCAAGGAGCCGCCACACATGAATAAGACTAATAACAACACTGAAAAATCCATGGCGGAAGAAGCTTCTGGAACAAGCGCGCTATTGGCAGCCAAAAAAGAAGAGGTTATTGATAAACAACTTGAAAGCACTAAGGCTGAAATGGGTGAGGTTCGAGAGGAGAATGAACGGTTAAAGATGTCGTTGAACAAGATCATGAGCGAGTACCGAATGCTTCAAATGCAGTTTCACAACATAGTTAACAACAAGCATGAAGATAATCAAGAAACAATAATGGAGGAAGCAGACCTAGTTTCGCTCAGCCTTGGAAGAGTTCCAGTTCCAAGAAGAAGCAATGAAGAAGATAAAAAAGTCTCTGATAGTAACAAGAGGAAGAAGGAGGATGAAGATGATGAAGAATTGAATGAGGAATTGGCACTTGGATTGGACTGCAAGTTCGAAACTTCGAAATCGGGGAGCACAACGGAAGCTACCAATTTGCCGAATAATAGTAACAAGGAAGAAGGTGGTGAGAGTACATGGCCACCACCAGCAAGCAAGGCCAGAGAAGGTGGTGGCGGCGGTGGTGGTGCGGCATCGGCATCGGCATCTGCATCAGTTGTAGAAGATGAAGTATCCCAACAGAATAATAATCCTGCTGCCAAGAAAGCTAGAGTTTGCGTCAGGGCAAGATGCGACACCCCGACTATGAATGATGGGTGTCAATGGAGGAAATATGGACAAAAGATTTCCAAGGGAAACCCATGCCCTCGAGCTTACTATCGCTGCACAGTTGCACCCTCGTGTCCCGTTAGAAAACAGGTGCAAAGATGTGCGGAGGACATGTCGATTCTAATCACCACCTATGAAGGGAACCACAACCACCCTCTCCCTCTCACAGCCACCGCCATGGCTTCCACAACCTCCGCCGCCGCATCCATGCTACTTTCCGGCTCCTCAACCTCACACACTATGGCTCCCACAAACACGGCCACCGCGGCCGCAGCCGGCAACCTCCACGGCCTGAACCTCTACCTCCCAGACGGCTCAAAATCAAGACAAATATACGTCTCAAACCCCGCACTATCATCCACACCATCACACCCAACAATAACCCTTGACCTCACTTCTTCAAACCCTAATTTGAATAATAATAATTCCTCATCTCCATTTGTTAGGTTTTCTTCAAACTACCCTAACCAACCAATCAGATACCCTTCTTCCACAAGCCTTAGCTTCAGTACTTCCAACGATTCCAATCCACTTTCTTGGAGCAATAATGGATTCCTCAGTAGCTACAATAGTACTCATCATCAACCATTCAACAGAAGCATCAACATGCTCAGTAATAATAATGTGAACTTCGAAAGGCAACAACAACAACAAACAATGGAGAACTTCTATCAGTCTTTCATGCAAAGGAACAACAGCAAGAATGCATCATCATCATCAGATCCTATTGCCGCTGCAACAAAAGCAATAACAGCGGATCCCAGTTTTCAATCGGCTTTGGCTGCGGCCTTGTCTTCGTTCATTGGTGGCGGCAGCGGCATTGGAAGCACACATCATCAAGGGAATAATTATAACCAAGTTGGTGGTGGTGGTGGTGGTGGTGGTGATGGAGAAAACAGTAATAATCTTATTAGTCAGAAGATGAAATTTTCAGAGCTGTTTCCAGTTTCCTCTACCTTGGCTTCGAGTTCGAAAGTCATCAATAATAGTAACAATGGCGGATGTGGTTCGAGCTTCTTGAACAAAACGCAACCAACAAAAACAACACAGAATAATGGAAGCTTCATGTTTCTTCCACCTTCTTTGCCATTTTCTTCTGCTCCGAAGAGTGCTTCTGCATCTCCCGGTGATAATGGAGGTGATGATCATAGATCATCATGA 2019 0.4512 MEFAARSGDDGGDAPLKEEKKRSDEYTDDSGSHGDNHDHAPSNKQDTTIVKEPPHMNKTNNNTEKSMAEEASGTSALLAAKKEEVIDKQLESTKAEMGEVREENERLKMSLNKIMSEYRMLQMQFHNIVNNKHEDNQETIMEEADLVSLSLGRVPVPRRSNEEDKKVSDSNKRKKEDEDDEELNEELALGLDCKFETSKSGSTTEATNLPNNSNKEEGGESTWPPPASKAREGGGGGGGAASASASASVVEDEVSQQNNNPAAKKARVCVRARCDTPTMNDGCQWRKYGQKISKGNPCPRAYYRCTVAPSCPVRKQVQRCAEDMSILITTYEGNHNHPLPLTATAMASTTSAAASMLLSGSSTSHTMAPTNTATAAAAGNLHGLNLYLPDGSKSRQIYVSNPALSSTPSHPTITLDLTSSNPNLNNNNSSSPFVRFSSNYPNQPIRYPSSTSLSFSTSNDSNPLSWSNNGFLSSYNSTHHQPFNRSINMLSNNNVNFERQQQQQTMENFYQSFMQRNNSKNASSSSDPIAAATKAITADPSFQSALAAALSSFIGGGSGIGSTHHQGNNYNQVGGGGGGGGDGENSNNLISQKMKFSELFPVSSTLASSSKVINNSNNGGCGSSFLNKTQPTKTTQNNGSFMFLPPSLPFSSAPKSASASPGDNGGDDHRSS 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02067 672 MobiDBLite consensus disorder prediction 196 219 - -
Aip01g02067 672 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 57 664 - -
Aip01g02067 672 MobiDBLite consensus disorder prediction 248 263 - -
Aip01g02067 672 MobiDBLite consensus disorder prediction 157 179 - -
Aip01g02067 672 Gene3D WRKY domain 263 341 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip01g02067 672 SUPERFAMILY WRKY DNA-binding domain 272 340 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip01g02067 672 MobiDBLite consensus disorder prediction 11 45 - -
Aip01g02067 672 Coils Coil 90 117 - -
Aip01g02067 672 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 57 664 IPR044810 GO:0003700
Aip01g02067 672 MobiDBLite consensus disorder prediction 623 672 - -
Aip01g02067 672 MobiDBLite consensus disorder prediction 401 437 - -
Aip01g02067 672 MobiDBLite consensus disorder prediction 565 588 - -
Aip01g02067 672 MobiDBLite consensus disorder prediction 46 70 - -
Aip01g02067 672 Pfam WRKY DNA -binding domain 280 338 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip01g02067 672 ProSiteProfiles WRKY domain profile. 274 340 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip01g02067 672 MobiDBLite consensus disorder prediction 1 81 - -
Aip01g02067 672 MobiDBLite consensus disorder prediction 623 659 - -
Aip01g02067 672 MobiDBLite consensus disorder prediction 152 266 - -
Aip01g02067 672 SMART WRKY_cls 279 339 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02067 Aip-Chr1 111448647 111453955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02067 97 572 WRKY Transcription Factor Family AT5G15130 40.157 7.96e-82 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip01g02067 WRKY 8.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02067 - - adu:107467779 1080.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04235 03 126571286 126575248 Aip01g02067 01 111448647 111453955 ECH
Aip01g02067 01 111448647 111453955 Aip01g02067 01 111448647 111453955 ECH