Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02063 ATGTTTGGAGATATATCTGCTAAGGCAGCTCACATGCTATCACTCCCTAAGGTTTCAGATTTCTTTGCAAGGCTAATACAGAGAGTTTCTCCCAAGAGTTATCATCAGGCCTGTGCAGAAGTTTATGTGACACAAAAGTTTCTAGAGAATTTCTGCGGTGATCAGGTTCGCTTCCTGGCAAGGTCTTTTGGGGTGCCTGGAAATCATCTTGGGCAGCAAAGTCACGGTTTCCGTTGGCCATATGGTCCGGTGGCTATTATTACTCCTTTCAATTTTCCATTAGAGATTCCAGTCCTTCAACTGATGGGTGCACTTTATATGGGCAACAAGCCAGTTCTTAAAGTTGATAGCAAGGTAAGCATTGTCATGGAGCAAATGTTGCGTCTGCTTCACACATGTGGTTTACCTGTAGAAGACGTAGACTTCATAAATTGTGACGGGAAGACAATGAACAAGCTGTTGCAGGAGGCAAATCCAAGAATGACCCTTTTCACTGGTAGTTCAAGAGTGGCAGAGAAATTGGCTGTTGATTTGAAGGGCCGGATTAAATTGGAAGATGCTGGATTTGATTGGAAAATACTGGGCCCTGATGTTGACCAGGAAGATTATGTTGCATGGGTCTGTGACCAGGATGCTTATGCATGCAGTGGTCAGAAGTGCTCAGCACAATCATTATTATTTATGCATGAGAACTGGGCTTCTACTTCCTTGGTATCCAAATTGAAAGGTCTTGCTGAGAGAAGAAAGCTAGAGGACTTGACAATTGGTCCAGTTCTCACTTTTACAACTGAATCAATGATGGATCACATGAAACAATTACTTGAGATACCAGGTTCAAAGCTGCTCTTTGGGGGCAAGCCTTTAGAGGGTCATTCTATTCCACCTATTTACGGTGCTATTAAGCCCACTGCTATTTATGTTCCCCTTGAGGAAATTGTGAAGGACAAGAATTATGAGCTTGTGACAAAAGAAATTTTTGGACCTTTCCAGATAATTACTGACTACAAAAGCAGTCAACTACCAACCGTGTTGGATACATTGGAAAAAATGCATGCACATTTAACTGCTGCTGTAGTTTCAAATGATCCTCTCTTTTTACAGGAAGTCATTGGTAGATCAGTGAATGGTACAACTTATGCTGGTCTAAGAGCAAGGACTACTGGAGCTCCACAAAACCATTGGTTTGGACCTTCTGGAGATCCTAGGGGTGCTGGAATCGGAACACCAGAAGCTATAAAACTAGTATGGTCTTGCCACAGAGAAGTTATATATGATTATGGTCCAGTACCAAACCGTTGGGAAATTCCTCCATCAACATGA 1320 0.4235 MFGDISAKAAHMLSLPKVSDFFARLIQRVSPKSYHQACAEVYVTQKFLENFCGDQVRFLARSFGVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHTCGLPVEDVDFINCDGKTMNKLLQEANPRMTLFTGSSRVAEKLAVDLKGRIKLEDAGFDWKILGPDVDQEDYVAWVCDQDAYACSGQKCSAQSLLFMHENWASTSLVSKLKGLAERRKLEDLTIGPVLTFTTESMMDHMKQLLEIPGSKLLFGGKPLEGHSIPPIYGAIKPTAIYVPLEEIVKDKNYELVTKEIFGPFQIITDYKSSQLPTVLDTLEKMHAHLTAAVVSNDPLFLQEVIGRSVNGTTYAGLRARTTGAPQNHWFGPSGDPRGAGIGTPEAIKLVWSCHREVIYDYGPVPNRWEIPPST 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02063 439 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 190 380 IPR016163 GO:0016620
Aip01g02063 439 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 3 189 IPR016162 GO:0016491
Aip01g02063 439 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 12A1, MITOCHONDRIAL 1 438 - -
Aip01g02063 439 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 213 224 IPR016160 GO:0016491
Aip01g02063 439 Pfam Aldehyde dehydrogenase family 17 381 IPR015590 GO:0016491
Aip01g02063 439 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 1 438 IPR044638 GO:0004029
Aip01g02063 439 SUPERFAMILY ALDH-like 17 406 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02063 Aip-Chr1 111100998 111105398 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02063 1 439 Aldehyde Dehydrogenase Gene Family AT5G62530 84.318 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02063 K00294 - gmx:100806579 817.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02063 01 111100998 111105398 Aip01g02063 01 111100998 111105398 ECH