Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02052 ATGCATTCAAGCAGTAAGAAGAAGTCATTAGCCACATTCCAGCATGATTCAAGTTGTATGAAACTTGTGACGGATGGAAGCGCTGCATTGGGGCTTGACTTGAGTTTCATTACGCATGTATTTTTGATGGAGTCAATTTGGGACAGAAGTATGGAGGAGCAAGTAATTAGCCGTGCCCATCGCATGGGTGCTTCTCGTCCTATTCATGTGGAAACCTTGGCAATGCATGGTACTATTGAAGAACAAAACATGATGCTGATAAATGTAGAAGATTTTCTAGTCAAGATGTTCCCAAATCTGAGAAGTTGCAGAGTCTTAggtggggcaagggcaaagaggacctga 345 0.3826 MHSSSKKKSLATFQHDSSCMKLVTDGSAALGLDLSFITHVFLMESIWDRSMEEQVISRAHRMGASRPIHVETLAMHGTIEEQNMMLINVEDFLVKMFPNLRSCRVLGGARAKRT 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02052 114 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 1 86 - -
Aip01g02052 114 PANTHER OS01G0952200 PROTEIN 1 86 - -
Aip01g02052 114 Gene3D - 1 100 IPR027417 -
Aip01g02052 114 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 87 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02052 Aip-Chr1 110597574 110597918 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02052 2 86 RAD5 or RAD16-like Gene Family AT3G16600 32.941 4.53e-11 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02052 - - adu:107471940 155.221