Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02046 ATGTCAACAATGGGAATTGCACTTGTGATAATCCTATCATTACTGTGGGTCCGGTTGCTATCGAAGAAGGAAAGAGCTGCTAGGAGATACACAGAAATGAAGAAACAAGTTGATTCAGAATCAAGAGCAAAACTTATTACATTCCATGGTGATCTTCCATACGCATCATCCGAGATCATAGAGAAGCTCGAGTCTCTTGATGCAGAGGATGTAGTAGGATCAGGAGGATTCGGGACTGTTTACCGGATGGTGATGAATGATTGTGGCACATTTGCTGTCAAGCGGATTGACAGAACTCGTGAAGGGTGTGATCAAGTGTTTGAGAGGGAACTTGAGATCTTGGGGAGCATCAAGCATATAAATCTGGTAAACCTACGCGGTTACTGCAGGCTCCCTTCTTCAAGGCTCCTTATATACGATTATTTGGCCATGGGAAGCTTAGATGATCTCTTGCATGAAAATACTCAACAACCACTGAATTGGAACGATCGCTTAAATATAGCCCTTGGTTCTGCCCGGGGTTTGGCGTACTTGCACCATGAGTGCTGTCCCAAAGTTGTACACCGCGACATCAAATCTAGCAACATTCTCCTTGATGAAAATTTGGAGCCTCGTATTTCTGATTTTGGTCTCGCAAGGCTTTTGGTCGATGAGGAGGCTCATGTCACCACAGTGGTTGCTGGCACATTTGGCTATTTGGCACCAGAGTACCTACAAAGTGGTAGAGCCACTGAAAAGTCAGATGTGTATAGCTTTGGAGTTCTATTGCTAGAACTTATAACTGGAAAGAGGCCTACTGATCCTTCCTTCGCAAAGCGAGGTTTAAATGTTGTTGGTTGGATGAACACATTGCTGAGAGAAAACAGATTGGATGATGTGGTAGACAAAAGATGCACCAATGTGGATGCAGGGACTCTTGAGGGGATTCTTGATATAGCAGCAAGATGCACGGATGGAAATGCGGAAGAACGTCCATCGATGAATGAGGTGTTACAGTTGCTTGAGCAAGAAAAGTACAACATGTTCATGGCTCAAATAGGTTGTGCAACCATTGGTGTTCTCGCATTCACCATATTCGGACCCGGATGGCTCGCTAGGAGTGCTGCTCTCTCTTCCTGCATTGCCTACATGATCTTCACCGGCACCGTTCACCCACCAGCCGCAAGCTTGCCATTGCTTTTCATCGACGCCGTTAAATTGCATCACTTGAATTTCTGGTATGCTTTGTTTCCTGGTGCTGCTGGATGCATTCTTCTAAGTTTGATTCAAGAGGTAGTTGTATACTTGAAGCAAAATGTCAAATTCTGA 1308 0.4472 MSTMGIALVIILSLLWVRLLSKKERAARRYTEMKKQVDSESRAKLITFHGDLPYASSEIIEKLESLDAEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRTREGCDQVFERELEILGSIKHINLVNLRGYCRLPSSRLLIYDYLAMGSLDDLLHENTQQPLNWNDRLNIALGSARGLAYLHHECCPKVVHRDIKSSNILLDENLEPRISDFGLARLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELITGKRPTDPSFAKRGLNVVGWMNTLLRENRLDDVVDKRCTNVDAGTLEGILDIAARCTDGNAEERPSMNEVLQLLEQEKYNMFMAQIGCATIGVLAFTIFGPGWLARSAALSSCIAYMIFTGTVHPPAASLPLLFIDAVKLHHLNFWYALFPGAAGCILLSLIQEVVVYLKQNVKF 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02046 435 Gene3D Phosphorylase Kinase; domain 1 25 141 - -
Aip01g02046 435 SUPERFAMILY Protein kinase-like (PK-like) 52 337 IPR011009 -
Aip01g02046 435 PANTHER RECEPTOR-LIKE PROTEIN 55 7 338 - -
Aip01g02046 435 ProSiteProfiles Protein kinase domain profile. 66 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02046 435 PANTHER LRR RECEPTOR-LIKE KINASE 7 338 - -
Aip01g02046 435 Pfam HPP family 339 426 IPR007065 -
Aip01g02046 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Aip01g02046 435 Gene3D Transferase(Phosphotransferase) domain 1 142 348 - -
Aip01g02046 435 SMART serkin_6 66 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02046 435 ProSitePatterns Protein kinases ATP-binding region signature. 72 94 IPR017441 GO:0005524
Aip01g02046 435 Pfam Protein kinase domain 69 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02046 Aip-Chr1 110106894 110111209 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02046 2 337 Receptor kinase-like Gene Family AT2G35620 57.738 1.06e-137 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Aip01g02046 Pkinase 6.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02046 - - gmx:100803920 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02046 01 110106894 110111209 Aip01g02046 01 110106894 110111209 ECH