Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02031 ATGTTGGAGGAGATTGCTGCTATTCTTCCTGGCCATGAATTTGCTTCTATTTTGTTGTCAAACATGGCTTATGCAGATGACAACGAATCTCTTGTTGAAGCTGAGATGTTTGTTTGGGATGCTTGCAAGGATCTGACCTTGATTATTTCAATGGTAGCTGCTACAGCTTCATTAGTACTGGGGATAAAATCTGAGGGTATTAAGGAAGGATGGTATGATGGTGGAAGCATTGCTTTTGCAGTTATTCTTGTTATTGTTGTTACAGCTATAAGTGATTATAAGCAGTCTCTTCAGTTTCGGGACCTAAATGAGGAGAAGAGAAACATTCGTTTGGAGGTAATTGGAGGAGGTAGAAGAGTTGAGATCTCAATCTATTGCAGATGGCAGTGGTGTTATGCTCTAATGGCTTCGGGATCCGATGATGCTCTTAAGAGTGTTGGTTTAGTCTTAGCAGGACTTACCAACTGA 468 0.4081 MLEEIAAILPGHEFASILLSNMAYADDNESLVEAEMFVWDACKDLTLIISMVAATASLVLGIKSEGIKEGWYDGGSIAFAVILVIVVTAISDYKQSLQFRDLNEEKRNIRLEVIGGGRRVEISIYCRWQWCYALMASGSDDALKSVGLVLAGLTN 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02031 155 PANTHER CATION TRANSPORTING ATPASE 37 125 - -
Aip01g02031 155 SUPERFAMILY Calcium ATPase, transmembrane domain M 37 108 IPR023298 -
Aip01g02031 155 PANTHER CALCIUM-TRANSPORTING ATPASE 8, PLASMA MEMBRANE-TYPE 37 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02031 Aip-Chr1 109419071 109420753 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02031 37 125 Primary Pumps ATPases AT5G57110 85.393 3.60e-46 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02031 K01537 - aip:107633681 239.58