Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02026 ATGGGCAACTGCAACGCATGCGTGCGAGGAAACGACGCCGTTTCTGACGAGAACAACAACAAAAACCCCAACGGTCAGGGCCGTAAGGACAAGAAAACCCGCCCGAACCCATTCGCTGAGGAAGGCCTACTACGGCACTCCCCAGCCCCGATCCGTGTGCTGAAAGACGTGATTCCGGTGGGGCCGCACCGGACCAGAATCACGGACAAGTATGTTTTGGGTCGTGAACTGGGCCGGGGCGAGTTCGGGATCACGTACCTTTGCACGGACCGGGAAACAAAGCAGGAGCTAGCCTGCAAGTCCATCTCGAAGCGGAAACTTCGCACCGCCGTGGACGTGGAAGACGTCCGGCGGGAGGTGGCGATCATGAACGCGCTTCCTGACCACCCGAACGTGGTGAAGTTGAAGGCGACTTACGAGGACGACGAGAACGTTCACCTTGTGATGGAGCTTTGTGCTGGCGGCGAGCTTTTTGATCGGATCGTGGCGAGAGGACACTACAGCGAGCGCGCGGCGGCGAACGTGGCAAGGACAATTGCAGAGGTGGTGAGGATGTGCCACGTCAACGGTGTCATGCATCGGGACCTGAAGCCGGAGAATTTCTTGTTTGCGAATAAGAAGGAGAACTCGGTTCTTAAGGCCATTGACTTTGGACTCTCCGTGTTCTTCAAGCCTGGAGAGAGGTTTACGGAGATCGTTGGGAGTCCGTACTATATGGCGCCGGAGGTATTGAAGAGGAACTATGGGCCCGAAGTGGATGTGTGGAGTGCTGGCGTCATTCTTTATATTTTGTTGTGTGGAGTTCCTCCGTTTTGGGCAGAGACCGAACAAGGGGTTGCATTAGCAATTTTGAGGGGAGTGATTGACTTCAAGAGGGAGCCATGGCCGCAGATATCAGATAGTGCTAAGAGCCTCGTGAGGCAGATGCTGGAGCCTGATCCTAAGAAGCGGTTGACAGCGGAGCAGGTTCTTGAACATTCCTGGCTACAGAATGCAAAGAAAGCTTCAAATGTTCCGTTAGGAGATATTGTGAGGACAAGGCTTAAGCAGTTCTCCGTGATGAACAGATTCAAAAAGAGAGCTCTTCGGGTGATTGCTGAACATTTATCTGTTGAAGAGGTAGAAATAATCAAAGATATGTTTACATTGATGGATACTGACAGAGATGGCAAAGTAACGTACGAGGAACTTAAGGCCGGGTTGAAGAAGGTTGGTTCGCAATTGGCTGAGCCAGAGATAAGGATGCTGATGGAAGTGGCTGATGTTGATGGGAATGGAGTACTGGACTATGGAGAGTTTGTAGCTGTGACGATTCACTTACAAAGAATGGAGAATGATGAGCATATCCGCAAAGCATTCACGTTTTTTGACAAAGATGGGAGTGGCTATATTGAGTTAGATGAGCTAGAGGAAGCATTGCTGGATGAGACTGGAGAAACTGATAAGGATGTATTGAATGACATCATGCGAGAAGTCGACACTGACAAGGATGGTCGAATCAGCTATGACGAATTTGTAGCCATGATGAAGACAGGAACTGACTGGAGAAAAGCATCAAGGCAGTATTCAAGGGAGAGATTCAAGAGCTTAAGCATAAATTTGATGAAGGATGGTTCGCTTCAGCTTCATGAT 1632 0.5018 MGNCNACVRGNDAVSDENNNKNPNGQGRKDKKTRPNPFAEEGLLRHSPAPIRVLKDVIPVGPHRTRITDKYVLGRELGRGEFGITYLCTDRETKQELACKSISKRKLRTAVDVEDVRREVAIMNALPDHPNVVKLKATYEDDENVHLVMELCAGGELFDRIVARGHYSERAAANVARTIAEVVRMCHVNGVMHRDLKPENFLFANKKENSVLKAIDFGLSVFFKPGERFTEIVGSPYYMAPEVLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVALAILRGVIDFKREPWPQISDSAKSLVRQMLEPDPKKRLTAEQVLEHSWLQNAKKASNVPLGDIVRTRLKQFSVMNRFKKRALRVIAEHLSVEEVEIIKDMFTLMDTDRDGKVTYEELKAGLKKVGSQLAEPEIRMLMEVADVDGNGVLDYGEFVAVTIHLQRMENDEHIRKAFTFFDKDGSGYIELDELEEALLDETGETDKDVLNDIMREVDTDKDGRISYDEFVAMMKTGTDWRKASRQYSRERFKSLSINLMKDGSLQLHD 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02026 544 ProSiteProfiles EF-hand calcium-binding domain profile. 480 515 IPR002048 GO:0005509
Aip01g02026 544 ProSitePatterns EF-hand calcium-binding domain. 493 505 IPR018247 -
Aip01g02026 544 SMART efh_1 484 512 IPR002048 GO:0005509
Aip01g02026 544 SMART efh_1 412 440 IPR002048 GO:0005509
Aip01g02026 544 SMART efh_1 376 404 IPR002048 GO:0005509
Aip01g02026 544 SMART efh_1 448 476 IPR002048 GO:0005509
Aip01g02026 544 ProSitePatterns EF-hand calcium-binding domain. 385 397 IPR018247 -
Aip01g02026 544 MobiDBLite consensus disorder prediction 23 39 - -
Aip01g02026 544 SUPERFAMILY Protein kinase-like (PK-like) 67 337 IPR011009 -
Aip01g02026 544 ProSiteProfiles EF-hand calcium-binding domain profile. 444 479 IPR002048 GO:0005509
Aip01g02026 544 CDD STKc_CAMK 70 328 - -
Aip01g02026 544 Gene3D Transferase(Phosphotransferase) domain 1 157 337 - -
Aip01g02026 544 Gene3D Phosphorylase Kinase; domain 1 72 156 - -
Aip01g02026 544 MobiDBLite consensus disorder prediction 1 45 - -
Aip01g02026 544 Pfam Protein kinase domain 71 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02026 544 SMART serkin_6 71 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02026 544 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Aip01g02026 544 ProSiteProfiles EF-hand calcium-binding domain profile. 372 407 IPR002048 GO:0005509
Aip01g02026 544 SUPERFAMILY EF-hand 353 522 IPR011992 -
Aip01g02026 544 PANTHER BNAA09G44420D PROTEIN 28 526 - -
Aip01g02026 544 CDD EFh 377 435 IPR002048 GO:0005509
Aip01g02026 544 ProSitePatterns EF-hand calcium-binding domain. 421 433 IPR018247 -
Aip01g02026 544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Aip01g02026 544 ProSiteProfiles EF-hand calcium-binding domain profile. 408 443 IPR002048 GO:0005509
Aip01g02026 544 PANTHER SERINE/THREONINE-PROTEIN KINASE 28 526 - -
Aip01g02026 544 ProSiteProfiles Protein kinase domain profile. 71 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02026 544 Gene3D - 338 513 - -
Aip01g02026 544 CDD EFh 448 510 IPR002048 GO:0005509
Aip01g02026 544 ProSitePatterns EF-hand calcium-binding domain. 457 469 IPR018247 -
Aip01g02026 544 Pfam EF-hand domain pair 447 510 IPR002048 GO:0005509
Aip01g02026 544 Pfam EF-hand domain pair 377 436 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02026 Aip-Chr1 108982595 108985771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02026 1 544 EF-hand Containing Proteins AT1G18890 80.699 0.0 895
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aip01g02026 Pkinase 2e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02026 K13412 - gmx:100800559 942.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02026 01 108982595 108985771 Aip01g02026 01 108982595 108985771 ECH