Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02021 ATGAAGGGTGTTCTAATTTCCATCAACTTTATCTTTTGTTGCTTCTTACTGTTTTTGGATTCATCAACTTCACTTCCTTTATGCGTTGACTCAAGTGCACCTTTCATCCTCAATAGCACACTTGAATTTTGTCCTTACAATGGAAGCACTTGCTGCAACTCCACAGAAGATACACAAATTCAGAAACAATTCCAGCTTATGAACATCTCTGATACTACCTGTGCCTCAGCTCTGAAATCGATACTTTGTGCGAGGTGTGATCCGTATTCGGCCGAGCTGTTTACAGTTCAATCGACGCCCCGATCAGTTCCCTTGCTCTGCAATTCCACCATTGCATCCAATTCCTCCCAGTCAAAGGCAGTAGCAGTGGAAGACTTCTGCTCTCAAGTATGGGAATCATGTCAATCTGTGTCAATAAAGAACTCGCCATTTTCGCCTTCATTACAAGGCCAAGCAGGGAGAACACCATCTAAAAGCAATCCAAGTAAACTCACAGATCAATGGCAGTCGAAAACAGATTTTTGTACTGCATTTGGTGGATCCTCCACTAGTGAATCTGTATGCTTTGAAGGAGAACCTGTTGCATTAAAGAACACTGACTCAGAAGCTCCTATTAGTCCTCCACATGGCTTGTGCCTTGAAAAAATTGGCAATGGATCCTATCTCAACATGGTTGCTCATCCAGATGGCACGAACCGAAAATTGCAGCTTGATGAGTCAAGTCCCTTTGTTGATCTAACTGATATGGTTTATAGTGATGCTAAACTTGGAATGATGGGAATGGCATTCCATCCGAAATTCGCAGAAAATGGCCGGTTCTTCGCCTCATTCACCTGTGACAAAGATAAGTGGTCTGGTTGTAATGGAATATGTTCTTGTAACTCAAATGTTAATTGTGATCCTTCAAAGATAGGCACAGGTAGTAGTGGTGCACAACCCTGCCAATACCAAGCTGTTGTTGCTGAATATACTGCTAATGGTACCGCGTCTCAGCCTTCATCGGCTGTAAGTGCTAAACCAACAGAGGTGAGAAGGATATTTACCATGGGGTTGCCTTCTAATACTGAGAATGGAGGTCAGATTCTCTTTGGACCTAATGATGGGTACTTGTACTTCATGATGGGAGATGGTTCAGGCACTGGTGATCCATACAACTTTGCTCAAAACAAGAAATCATTGCTTGGGAAGATTATGAGGCTTGATATAGACAACATCCCAAGTGCAGCCGAAATTAGCAAACAAGGTCTTTGGGGTAGCTATTCCATTCCTAAGGACAATCCATTCAGCCAAGACAATGGTTCACAGGCTGAAATATGGGCCTTGGGATTAAAAACTCCATGGCGATGCAGTTTTGATTCAGAAAGACCTTCCTACTTTTTCTGTGGAGATGCTGGACAGGATCTTTATGAGGAAGTGGATCTCATCACAAAAGGTGGAAACTATGGCTGGCGTGTTTATGAGGGTCCCTATCCATTCACCCCTAATGAATCACCTGGAGGCAATACCTCCAAAGACTCCATAAATCCAATTATGCCAATACTTGGATACAACCATTCGGAGGTTAACAAGAATGAAGGGTCAGCATGCATCATTGGGGGTTATATGTATCGATCTAACACTGATCCTTGCATGTATGGAAGGTACCTGTATGCTGATCTATATTCAGTTGCAGTGTGGGAAGCAACAGAAGATCCTGTAAACAGTGGAAACTTCAGCAAAAGCAGAATCCCCTTCAGCTGTTCACATGATTCTCCTATCAAATGTGATCCTGTGCCTGGAACCTCCCTCCCAGCGCTAGGCTACATCTACTCATTTGGAGAAGACAACAACAAAGACGTGTATATCCTTGCGAGCGAAGGCGTCTACAGAGTTGTTCGTCCGAGTCGCTGCAGTTACACTTGCTCCCAGGAAAAGGCAACAACAGAGGCTCCTTCTCCTTCTACTTCTCCATCTCATGCATGCCGGATCTCCCCCTCCTCCGGCTACCGCCCAACGCCGATCCTCGTCGTCGCCGGAACGCAATTCCCTAAACCACATCGCCGGCGACGATCACGCCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGCGGAGGAGGAGGAGGAGGAAGAAGAAGATGAGGAGTCGCCGCCGCTGTCGCCACAGCAGCAGCAATGCGCGAAGATCGTGACGCAGCTCGTGGAACCGCCGCTGTCGCCGTCGAGGATGCCGCGGTGGAACCTCCGGTGCATGTGGGAGTTGGCTTCGGTGCTCAATTTTTTGCATCTGTTTAGGCCACTTTTGAATATCTCACTTGAATTTTCTGCTGAAGAGTTCGAGACTGCACTTCTTACTCCCAATGACACTTTGAGTGATATACATATGCCTTTGCTTAAGGCAATCCCTCCTATTATACGCATGGCACTCACACGTGATACTTGGATAACTGTATTATGCAGAAAATTGAGAGATTGGTGGCATTGGGTTGCTGATGGGGATCTTCCAATTGTTGCTTCACATGGGACGGAAATTGAAGTATATAAATCGCTTGATCCAGGGGTTCGTCTTGTGATCTTAAAAGCATTATGTGACATTCGTGTTGAGCAAGAAGATATCCGGAATTATATTGACAACTCCCTCAAACATGGTGTTAAACTCTCAACATTTCGTAAAGAGCGAATTGGAGGTGATTCACATGGAATTTCTTATTGGTATGAAGATGACCCAGTTGTTGGTCATAGGCTGTATCGAGAAACAAGAAAAACTGAAGTGATTCAAATGAAGAAAGGGAAACCAAGAGGTTCACTGGTTCTTTCTAATACATCATACCAGTGGGAATCTGTAGCTACCAATTTTGATGAATTTCAAGATGTTTCTGAGAAGCTTTTCTCAAGTAAAAACAGGACAGAGATCTCTGTGGGGAAAAAGCTAAAGATAGACATGCTTCCTGAAATTGAGAAAGTCCATAAGAGAAAGGAAAAGTTGCTGAAAAAGCAACAGAGAGAGGCCCTTCTTCTTGATAATTACATGATTGCTGATGGTCTTGCTACCGGACGTTCACTGCGTTATAGGAAGCCTGTTACCTACACTTTCGATGATTATGATAAGTCCATAAATGAGGCAATCAAAGAAACCAAACGGAAACAACCATCCCCAGAATCCATGCCCAAGAGAGAGTTGGTAGCAAAACCGGAAGCTTTTAGTAATGGTAAATGGAGTGGTCCTTCACATTCCCCTCAAAATCTGGATTTTGGTTGGTCATCTCCAAAATCACCTTACTCTGATGATGATGAGGAAGACCATATAACGGATCCACTTGATCGAACAAATCGTCGAAGACAGAGACCGAAGCGGTATTCAGATAAAGAGTTCCTTGATCCTGTATCAGATAATGATGCTGACTTTGACAGTGATGATGATATTGTTGGAGAAGCTGTATATGATGAAGAGTATCTCAAGAAGCGTAAGCAGAGAAGGAAGCTTTCTAGTAGCTCCGAAGGAGATGAAGAATATCAGTGGGATGAAGATAATGTTGAAGAGGAAGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGATGATGATGACGATGAAGATTCCTTGAGTATCAGCGAGGACAGTGACAAACCCCGTAAGTTCAAGGCATTGCGAGGCCGTACTACGAGGGATTCTAAACGCAGGCCTGTCAATGATTTTCAATCAGGTCTAAGGCGCAGTAAGAGGTCAACCCGAAACCGTGTAAATTACCGACAATACGAGGCGTCTGAATCAGAACAAGAGTTTATTAAACCTGAAAAGTCTAATACATCAGCTGATCACTCAGATCCCAGTGAGAATGGGGAATATATGATGGAAAGTGAAGATTCCGACCGGAATGATGATGAAGACCAGGAAATGAAAGTAGAAGAGCAGCCTGCTACTTATCCCATAGTAGAAGAGAATGAACAAAATGCACCTCCCGAAAAGTCAAGTAGTCCTGGTCAGGAGGAAGTTGAGAGCATCGGAAAGCACCATTTCCTTGATTTGAACGAGCTCGCCCCTAGCTCGGGTTTCGATGATGGTCCAAATACAATAATGAAAGATGAAGACAATGAATGA 4125 0.4322 MKGVLISINFIFCCFLLFLDSSTSLPLCVDSSAPFILNSTLEFCPYNGSTCCNSTEDTQIQKQFQLMNISDTTCASALKSILCARCDPYSAELFTVQSTPRSVPLLCNSTIASNSSQSKAVAVEDFCSQVWESCQSVSIKNSPFSPSLQGQAGRTPSKSNPSKLTDQWQSKTDFCTAFGGSSTSESVCFEGEPVALKNTDSEAPISPPHGLCLEKIGNGSYLNMVAHPDGTNRKLQLDESSPFVDLTDMVYSDAKLGMMGMAFHPKFAENGRFFASFTCDKDKWSGCNGICSCNSNVNCDPSKIGTGSSGAQPCQYQAVVAEYTANGTASQPSSAVSAKPTEVRRIFTMGLPSNTENGGQILFGPNDGYLYFMMGDGSGTGDPYNFAQNKKSLLGKIMRLDIDNIPSAAEISKQGLWGSYSIPKDNPFSQDNGSQAEIWALGLKTPWRCSFDSERPSYFFCGDAGQDLYEEVDLITKGGNYGWRVYEGPYPFTPNESPGGNTSKDSINPIMPILGYNHSEVNKNEGSACIIGGYMYRSNTDPCMYGRYLYADLYSVAVWEATEDPVNSGNFSKSRIPFSCSHDSPIKCDPVPGTSLPALGYIYSFGEDNNKDVYILASEGVYRVVRPSRCSYTCSQEKATTEAPSPSTSPSHACRISPSSGYRPTPILVVAGTQFPKPHRRRRSRRXXXXXXXXXXXXXXXXXXXXXXXXXXXAEEEEEEEEDEESPPLSPQQQQCAKIVTQLVEPPLSPSRMPRWNLRCMWELASVLNFLHLFRPLLNISLEFSAEEFETALLTPNDTLSDIHMPLLKAIPPIIRMALTRDTWITVLCRKLRDWWHWVADGDLPIVASHGTEIEVYKSLDPGVRLVILKALCDIRVEQEDIRNYIDNSLKHGVKLSTFRKERIGGDSHGISYWYEDDPVVGHRLYRETRKTEVIQMKKGKPRGSLVLSNTSYQWESVATNFDEFQDVSEKLFSSKNRTEISVGKKLKIDMLPEIEKVHKRKEKLLKKQQREALLLDNYMIADGLATGRSLRYRKPVTYTFDDYDKSINEAIKETKRKQPSPESMPKRELVAKPEAFSNGKWSGPSHSPQNLDFGWSSPKSPYSDDDEEDHITDPLDRTNRRRQRPKRYSDKEFLDPVSDNDADFDSDDDIVGEAVYDEEYLKKRKQRRKLSSSSEGDEEYQWDEDNVEEEEEEEEEEEEEDDDDDEDSLSISEDSDKPRKFKALRGRTTRDSKRRPVNDFQSGLRRSKRSTRNRVNYRQYEASESEQEFIKPEKSNTSADHSDPSENGEYMMESEDSDRNDDEDQEMKVEEQPATYPIVEENEQNAPPEKSSSPGQEEVESIGKHHFLDLNELAPSSGFDDGPNTIMKDEDNE 1374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02021 1374 MobiDBLite consensus disorder prediction 1140 1155 - -
Aip01g02021 1374 MobiDBLite consensus disorder prediction 1052 1070 - -
Aip01g02021 1374 Pfam DDT domain 766 811 IPR018501 -
Aip01g02021 1374 MobiDBLite consensus disorder prediction 713 727 - -
Aip01g02021 1374 MobiDBLite consensus disorder prediction 1178 1212 - -
Aip01g02021 1374 Coils Coil 1178 1208 - -
Aip01g02021 1374 MobiDBLite consensus disorder prediction 1260 1295 - -
Aip01g02021 1374 PANTHER DDT DOMAIN-CONTAINING PROTEIN DDR4 707 1373 - -
Aip01g02021 1374 MobiDBLite consensus disorder prediction 1156 1177 - -
Aip01g02021 1374 Coils Coil 992 1012 - -
Aip01g02021 1374 MobiDBLite consensus disorder prediction 1081 1098 - -
Aip01g02021 1374 Pfam Glucose / Sorbosone dehydrogenase 240 510 IPR012938 -
Aip01g02021 1374 MobiDBLite consensus disorder prediction 1102 1139 - -
Aip01g02021 1374 MobiDBLite consensus disorder prediction 640 660 - -
Aip01g02021 1374 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 857 887 IPR028942 -
Aip01g02021 1374 Coils Coil 714 726 - -
Aip01g02021 1374 PANTHER REMODELING AND SPACING FACTOR 1 707 1373 IPR028938 GO:0006355|GO:0031213
Aip01g02021 1374 MobiDBLite consensus disorder prediction 640 658 - -
Aip01g02021 1374 MobiDBLite consensus disorder prediction 1052 1374 - -
Aip01g02021 1374 SUPERFAMILY Soluble quinoprotein glucose dehydrogenase 257 495 IPR011041 -
Aip01g02021 1374 MobiDBLite consensus disorder prediction 145 166 - -
Aip01g02021 1374 Gene3D - 219 596 IPR011042 -
Aip01g02021 1374 MobiDBLite consensus disorder prediction 672 736 - -
Aip01g02021 1374 MobiDBLite consensus disorder prediction 1231 1247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02021 Aip-Chr1 108215531 108227939 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Aip01g02021 GSDH 2.2e-20 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02021 - - aip:107610968 1135.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02021 01 108215531 108227939 Aip01g02021 01 108215531 108227939 ECH