Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02002 ATGGTGTCGACATCTCAGAAGAAAAGCCTGCACTCTCTAATGGCAGCTAACCTGAGCAAGCTCACCATACCTTGTTCTTCATCATCACCACCTCCCAACAATGAACAGGATTTCGACTTTAACCATGTATTCGGGCACCACCACGACGAACCCTCAGCTGCAATGAGTCCGCACGTGATTCACAGCAGGTCCCACTCCTTTGTGGGCCCCTCCCCTCGCGTGGCCCCACCCTCCAACCCCATCCTCTCCTTCGTCAACGAACTCTCCTCTCAGAGCGAGGGAGAAGAATCCGAACAAGTGCCTCTCAATGTCATCGAAGAAGAGAAAGTGAGCCCTCGAATTGGGCCTGCGGATTTCGAGATTTTGAGGGTTGTTGGTCAGGGTTCGTTTGGGAAAGTGTTTCTTGTACGGAAGAAGAAGAAGCAGCAGCATCAAAAGAAAGAGAGCGAAGAAGAGTGCTGTGAAGATGGTGTGTTTGCGATGAAGGTGATGAGGAAGGAGACCATCATCAAGAAGAACCATGTGGATTACATGAAAGCTGAGAGGGATATTCTCACTAAAGTTGTTCATCCTTTCATTGTTCAACTTCGCTACTCTTTCCAGACTAAATCTAAGTTGTATTTGATTTTGGACTTCATAAATGGAGGGCATCTCTTCTTTCATCTCTATCGACAGGGCATCTTCAGTGAGGATCAGGCAAGGATTTACACTGCTGAGATAGTATCTGCTGTTTCACATCTTCACAAGAATGGCATCGTGCACCGGGATCTTAAACCTGAGAACATACTTATGGATGGTGATGGGCATGTGATGCTAACTGATTTCGGATTGTCGAAAGAGATTGACGAATCAGGAAGATCCAACTCTATGTGTGGGACCATGGAATATATGGCTCCGGAAATCATACTGGCCAAAGGCCATAATAAGGATGCAGATTGGTGGAGCATTGGTATTTTGTTGTATGAGATGCTAACAGGGAAGGCACCATTCACACACACGAACAAAAAGAAGCTTCAGGAGAAGATTATTAAAGAGAAAGTTAAACTTCCACCAACGGTTTCCACAGAAGCTCATTCTTTGCTCAAAGGGTTGCTGCAAAAGGATCCATCAACAAGGTTAGGCAACGGGCCAAATGGAGATGAACAGATCAAAAGTCACAAATGGTTTCGACCAATCAATTGGAAGAAATTGGAGGCGAGAGAACTCAAACCTAAGTTCAAACCAGATGTCTCCGGTAAAGAGTGTACAGCTAACTTTGACCAATGCTGGACGGCAATGCCTCCAGATGACTCACCAGCTTCCACTCCCACGGCCGGTGACCATTTCCATGGCTACACGTATGTCGCACCAAACCCTTGGCTTTCATCCAAATAG 1374 0.4629 MVSTSQKKSLHSLMAANLSKLTIPCSSSSPPPNNEQDFDFNHVFGHHHDEPSAAMSPHVIHSRSHSFVGPSPRVAPPSNPILSFVNELSSQSEGEESEQVPLNVIEEEKVSPRIGPADFEILRVVGQGSFGKVFLVRKKKKQQHQKKESEEECCEDGVFAMKVMRKETIIKKNHVDYMKAERDILTKVVHPFIVQLRYSFQTKSKLYLILDFINGGHLFFHLYRQGIFSEDQARIYTAEIVSAVSHLHKNGIVHRDLKPENILMDGDGHVMLTDFGLSKEIDESGRSNSMCGTMEYMAPEIILAKGHNKDADWWSIGILLYEMLTGKAPFTHTNKKKLQEKIIKEKVKLPPTVSTEAHSLLKGLLQKDPSTRLGNGPNGDEQIKSHKWFRPINWKKLEARELKPKFKPDVSGKECTANFDQCWTAMPPDDSPASTPTAGDHFHGYTYVAPNPWLSSK 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02002 457 SUPERFAMILY Protein kinase-like (PK-like) 118 446 IPR011009 -
Aip01g02002 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Aip01g02002 457 Gene3D Transferase(Phosphotransferase) domain 1 213 408 - -
Aip01g02002 457 ProSiteProfiles Protein kinase domain profile. 119 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02002 457 PANTHER RIBOSOMAL PROTEIN S6 KINASE 5 456 - -
Aip01g02002 457 Pfam Protein kinase C terminal domain 410 447 IPR017892 GO:0004674|GO:0005524|GO:0006468
Aip01g02002 457 SMART serkin_6 119 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02002 457 Pfam Protein kinase domain 119 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02002 457 ProSiteProfiles AGC-kinase C-terminal domain profile. 390 457 IPR000961 GO:0004674|GO:0005524|GO:0006468
Aip01g02002 457 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 5 456 - -
Aip01g02002 457 Gene3D Phosphorylase Kinase; domain 1 117 432 - -
Aip01g02002 457 Coils Coil 132 152 - -
Aip01g02002 457 SMART pkinase_C_6 390 449 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02002 Aip-Chr1 107115173 107118582 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02002 27 450 AGC Kinase Gene Family AT3G08720 56.798 8.59e-176 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Aip01g02002 Pkinase 8.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02002 K04688 - gmx:100798259 655.21