Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01997 ATGTGTAGCACCTTCGCCGCCGCCGCAGACTCCTCCATCTCCGGCGACGGTGACTCCCCCGCCGCCGGCGAGATTATGCTGTTCGGCGTTAGGGTGGTGGTGGACTCCATGAGGAAAAGCGTCAGTATGAACAATCTGTCGCAGTACGTGCATCCTCAAGATGAATCCAACAACAACAAAGACGCTGCCTTCTCCGCCACCGGTTACGCGTCCGCCGACGACGCCGCTCCTCACAACTCCGGCAAGAACCGCGAGCGCGAGCGCAAGCGAGGTGTTCAGTGGACGGAGGAAGAGCACAAGCTATTCCTGGTGGGATTGCAGAAGGTAAGGAAAGGTGATTGGAGAGGGATCTCTAGGAACTACGTCAAGACTCGGACGCCCACGCAGGTCGCCAGCCATGCTCAGAAGTACTTCCTCCGCCGGAGCAATCTCAACCGCCGTCGCCGTAGATCCAGCCTCTTTGACATCACCACCGATTCGGTCTCTTCGATCCCAATGGAGGAAGAACAGATCCAGAACGGAGACAGTGTGCCTCATTCACAGCCTCTGTGCCCTGCAGCCCCTGAGAATAGCAACACCAATGGATTTCCGATGGTGCCGGTGTATCCATTGGGGGTTGGTCCAGGTGTGATTTCATCAGTCGAAGCTGGGAATCCAATGGATGAACTAACTCTAGGACAGGCAAACATGGAGCTTAATGCGCAAACCAAGCTACTCCATCCGATTCCTGTTGCCTCAAATCCTAAAACCTGCACCGTGTCTGATGTTGCCTCCGGCTCTAATTCGCCCCTCGACTTGCCAACACTGTCCCTGGGACTATCCTTCACATCTGATCAAAGACAGACTCCATCAAGACATTCGGCTTTCCATTCGATTCCGAGTTTAAATAACGGAGATAGCGTCATAAGTGTTGCTTGA 918 0.5447 MCSTFAAAADSSISGDGDSPAAGEIMLFGVRVVVDSMRKSVSMNNLSQYVHPQDESNNNKDAAFSATGYASADDAAPHNSGKNRERERKRGVQWTEEEHKLFLVGLQKVRKGDWRGISRNYVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDSVSSIPMEEEQIQNGDSVPHSQPLCPAAPENSNTNGFPMVPVYPLGVGPGVISSVEAGNPMDELTLGQANMELNAQTKLLHPIPVASNPKTCTVSDVASGSNSPLDLPTLSLGLSFTSDQRQTPSRHSAFHSIPSLNNGDSVISVA 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01997 305 Gene3D - 92 144 - -
Aip01g01997 305 MobiDBLite consensus disorder prediction 69 92 - -
Aip01g01997 305 Pfam Myb-like DNA-binding domain 93 138 IPR001005 -
Aip01g01997 305 CDD SANT 94 138 IPR001005 -
Aip01g01997 305 ProSiteProfiles Myb-like domain profile. 86 138 IPR001005 -
Aip01g01997 305 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 142 IPR017930 -
Aip01g01997 305 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 89 140 IPR006447 GO:0003677
Aip01g01997 305 SUPERFAMILY Homeodomain-like 88 143 IPR009057 -
Aip01g01997 305 SMART sant 90 140 IPR001005 -
Aip01g01997 305 PANTHER KIN2 17 305 - -
Aip01g01997 305 MobiDBLite consensus disorder prediction 78 92 - -
Aip01g01997 305 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 17 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01997 Aip-Chr1 106730773 106733933 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip01g01997 Myb_DNA-binding 1.5e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01997 - - aip:107632799 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01997 01 106730773 106733933 Aip01g01997 01 106730773 106733933 PCT